Metallosphaera sedula Ron 12/II: DFR88_07135
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Entry
DFR88_07135 CDS
T05966
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
mpru
Metallosphaera sedula Ron 12/II
Brite
KEGG Orthology (KO) [BR:
mpru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mpru03016
]
DFR88_07135 (endA)
Enzymes [BR:
mpru01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
DFR88_07135 (endA)
Transfer RNA biogenesis [BR:
mpru03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
DFR88_07135 (endA)
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Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
TSEN34_N
Motif
Other DBs
NCBI-ProteinID:
QCO30289
UniProt:
A0A4D8S404
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Position
complement(1338629..1339177)
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AA seq
182 aa
AA seq
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MKISGELLGDKIVIFNLDEARTLYQMGFYGKPLTISKPKSAKDINKPLELSLIEGLYLSE
QGILEVRHLGEVLDIARLENYATSVVAKFKPIYLVYKDLKRRGFIVRSGIKFGSDFAIYT
LGPGVEHAPFVVSVIDSSERLSVNELMSYGRVSHSTRKKLVLAIVNTQLNEIKYIMFKWV
KL
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatttctggagagttgttgggagataaaatagtaattttcaacttagatgaggca
agaaccctttaccagatgggtttctatgggaaaccattaaccatttccaaacctaagtct
gccaaggatataaacaaaccactggaactttcattgattgagggcttatacttatctgag
caggggattctagaggttagacacttaggtgaagttctagatatagcgcgactggagaat
tacgctacctctgttgtagctaagttcaaacccatttatctggtttacaaggatctgaag
agaagaggtttcatagtcagatctggcataaagtttggttcagatttcgcaatttacacc
ttaggacctggagtggaacatgcaccatttgtagtatctgtaatagactcgtctgagaga
ctttctgtaaacgaactgatgagttatggaagagtttcacacagcacgaggaaaaaattg
gtgttagctattgtcaacactcaactaaatgagatcaagtacataatgtttaaatgggtg
aagctatga
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