Metallosphaera prunae: DFR88_07175
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Entry
DFR88_07175 CDS
T05966
Symbol
tfb
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
mpru
Metallosphaera prunae
Pathway
mpru03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mpru00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DFR88_07175 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpru03021
]
DFR88_07175 (tfb)
Transcription machinery [BR:
mpru03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
DFR88_07175 (tfb)
Prokaryotic type
Archaeal type
TFB
DFR88_07175 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Cyclin_C
HTH_AsnC-type
BRF2-like_C_cyclin_rpt
HTH_Tnp_ISL3
HTH_24
HTH_Crp_2
Sigma70_r4_2
HTH_11
Motif
Other DBs
NCBI-ProteinID:
QCO31274
UniProt:
A0A4D8RZQ3
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All DBs
Position
complement(1343790..1344707)
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AA seq
305 aa
AA seq
DB search
MSKENSSDTQCPPDKIIFDADRGEYICSETGEVIEERIVDQGPEWRAFTPEEKEKRSRVG
GPLNQTIHDRGLSTLIDWKDKDAIGRNLDPKRRLEVLRWRKWQIRARIQSSIDRNLAQAM
NELERIGNLLGLPKSVKDEGALIYRKAVEKGLVRGRSIESVVAAAIYASCRRMKIARTLD
EIAQYTKANRKEVARCYRLLLRELNVDVPVSDPKDYVTRIGSLLGLSGASMKLAAEILEK
AKNVGLTAGKDPAGLAAAAIYIAALLNEERRTQKEIAQVAGVTEVTVRNRYKELIQELKI
EIQNQ
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaggaaaattcatctgatactcaatgcccccctgataaaataattttcgacgct
gacaggggggagtacatatgctctgaaactggtgaagttatagaggaaaggatagtagac
caaggtccagagtggagagccttcactccggaggaaaaggagaaaaggagcagggttggt
ggacccctcaatcagaccatacatgatcgcgggttgtccacactgattgactggaaggat
aaggatgccataggaagaaaccttgacccaaagaggagattggaagtactgagatggaga
aagtggcagattagggccaggattcagagttccatagataggaacctcgcccaagccatg
aatgagctggaaaggattggcaacctgctaggtcttccaaaatccgtaaaggatgagggc
gctctcatttacaggaaggcagttgagaagggtctagtcagaggaagatcaatagagagc
gtcgtagctgcggcaatctacgcttcctgtagacgtatgaaaattgctagaactttggat
gaaatagcgcaatacacaaaggcaaacagaaaggaagtggccaggtgttataggcttcta
ttgagggaacttaacgttgatgttccagttagtgatccaaaggactacgttaccagaata
ggatccttacttgggctcagcggagcatccatgaagcttgccgcagagatattggagaag
gccaagaatgttgggttaacagctggaaaagatccagcaggactggctgcagctgcaatt
tacattgctgcactcctcaacgaggagagaagaacccagaaagagatagctcaggtcgct
ggagtaaccgaagtgactgtcagaaacagatacaaagaacttatccaagagctaaagatt
gaaatacaaaatcaataa
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