Metallosphaera sedula Ron 12/II: DFR88_09570
Help
Entry
DFR88_09570 CDS
T05966
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
mpru
Metallosphaera sedula Ron 12/II
Pathway
mpru03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mpru00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DFR88_09570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpru03021
]
DFR88_09570
Transcription machinery [BR:
mpru03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
DFR88_09570
Prokaryotic type
Archaeal type
TFB
DFR88_09570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Sigma70_r4
Zn_ribbon_PADR1
Sigma70_r4_2
HTH_11
HTH_Mga
SaeA_1st
HTH_Tnp_ISL3
HTH_3
Motif
Other DBs
NCBI-ProteinID:
QCO30701
UniProt:
A0A4D8RU71
LinkDB
All DBs
Position
complement(1779030..1779914)
Genome browser
AA seq
294 aa
AA seq
DB search
MKCPICEGTEIIYDAEHGNYVCARDGTVIEENVPDPGPEWREFDAGDRNKKRRVGAGITD
RVHDKGFSTIIGGGRVKDKMKAIRLQRLQNKSRVTSKDKKLVTYLSILNSEASKLGLPGY
VKETAAGVIKKLIESGLARRIDTYALIAATLFYVSRLYKIPLQLNEIKKLFNIDSSAFWK
ASTRVQNVIQKSTFMSNFGGPSPLEHIPDIVNRAKLPPHVETMAAEIASILIKNAITSGK
GHLSVAAAAVYLASTILDHKKTQKELAEVLNITEVTIRNRYKEIVNSLDVEVKL
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgccccatttgtgagggtactgagataatatatgatgccgagcatggtaactac
gtttgtgccagggatggaactgtaattgaagaaaacgtgccagatcctggccctgagtgg
agagagttcgatgcaggcgataggaacaagaagagaagggtaggagctgggatcacagat
agggtacatgacaaaggattttccaccattattggaggtggaagagtaaaggataaaatg
aaggcaataaggcttcagagacttcaaaataagtcaagggttacatcaaaggacaagaaa
ctagttacgtatctatcgatactcaacagcgaggcatcgaagttgggactacctggatac
gttaaggagacggctgccggggtcataaagaagttgatcgaatcgggtctcgcgaggagg
attgatacgtacgcactaattgcagcgacgttattctatgttagcagactgtacaagatc
ccactccagttgaatgagataaagaagcttttcaacatagactcaagcgccttctggaaa
gcctcaaccagagtccagaacgttatacagaagagtacgttcatgtctaactttggagga
ccttctccactggaacacataccagatatcgttaacagggctaagttacctccccatgtg
gaaaccatggccgcagaaatagcgtcgatcctgataaagaacgcaataaccagcgggaag
ggccacttatctgttgccgcggcggcagtctacttggccagcaccatattggatcacaag
aagacgcagaaagaacttgcagaggttctgaacatcaccgaggttaccataagaaataga
tataaggagatagtaaactcacttgacgtcgaggtcaaactgtga
DBGET
integrated database retrieval system
