Melissococcus plutonius ATCC 35311: MPTP_1260
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Entry
MPTP_1260 CDS
T01492
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mps
Melissococcus plutonius ATCC 35311
Pathway
mps03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MPTP_1260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mps03019
]
MPTP_1260
03400 DNA repair and recombination proteins [BR:
mps03400
]
MPTP_1260
Enzymes [BR:
mps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MPTP_1260
Messenger RNA biogenesis [BR:
mps03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MPTP_1260
DNA repair and recombination proteins [BR:
mps03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MPTP_1260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Acid_PPase
Motif
Other DBs
NCBI-ProteinID:
BAK21708
UniProt:
F3YB30
LinkDB
All DBs
Position
complement(1342989..1344761)
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AA seq
590 aa
AA seq
DB search
MADTKQLLKKVFGYEQFRPGQQELINCVLNRQNVLGIMPTGGGKSICYQLPALMLPNLTL
VISPLISLMKDQVDALNLLGIPATFINSTISIQEMNHRIQLAVDKKVKLLYIAPERLESY
DFQQLLLHVPIDVLAVDEAHCISQWGYDFRPSYLRVAEIIHQFKQQPTIIALTATATPQV
AEDILKKLYIPIDNQVKTGFLRENLSFQVIRDQNRDLFLLEYLKLNQAQAGIIYVNTRKE
AERIYLLLKSKKIAVGIYHGGMSEQERNDNQEKFLFDQLQVIAATNAFGMGINKSNVRFV
IHAQTPGNIESYYQEAGRAGRDGLPGDAILFYTPQDLQIHHYFIEQMTCTDDYKQQQYTK
LKEISQYANTQVCLQQFILNYFGDHGLECHKCTNCLDQRELVDITIDAQKILSCVKRMGE
RFGKGLVGRVLTGSKDKKIEQWHLDQLPTYGLLKDRTQKEVVQLIDYLTAKGQLIATSGQ
YPILQVSPLGIEVLLGKCSVFRKEDQKVHKVIDNDELFETLRELRMDLAQKANVPPYLVF
SDSTLKEICEKLPKNTIQFLQIKGVGQNKLDKYGELFINKIKEFQSENKI
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggctgatacaaagcaattactaaaaaaagtatttggatatgagcaatttcgtcctgga
caacaagaattaattaattgtgttttgaatagacaaaatgttctgggaattatgccaaca
ggtggaggaaaatctatctgttatcaattacctgccctgatgctacccaatttaaccttg
gtgatttcacctttgatttcattaatgaaagatcaggtagatgctttaaatctgttagga
attccagctacctttattaatagcacaatttctattcaagaaatgaatcatcggatccaa
ttagcagtagataagaaggtaaagttattatatattgcaccagaacggctagaatcttat
gattttcaacaacttttattacatgtacctattgatgtactagccgttgatgaagctcat
tgtatttctcagtggggatacgattttagacctagctatttacgggtagcagagattatt
caccaatttaaacaacagccaactataattgcattgactgcaactgcaacgccacaagtg
gcggaagatattctaaaaaaattatatattcctattgataaccaggtaaagacaggattt
ttaagagaaaacctatcttttcaggtaattagagaccaaaatcgcgacttattcttatta
gaatatctcaaattaaaccaagcacaagcaggaattatttatgtcaatacacgtaaggaa
gctgaacggatttatttattattaaaaagtaaaaaaattgctgttggaatttatcatggt
ggaatgagcgaacaagaacgaaatgacaatcaagaaaaatttctgttcgatcaactacaa
gttattgctgctaccaatgcttttggcatggggattaataaaagtaatgttcgttttgtt
atccatgcacagacacctggtaatattgaatcttactatcaggaagcaggacgcgctggt
cgtgatggtttgccaggagatgcgattttattttacacccctcaagatttacaaattcat
cattattttattgaacaaatgacttgtacagatgattataagcaacaacaatatacaaaa
ctaaaagaaatttctcaatatgcaaatactcaagtatgcttacagcaatttatcttaaat
tactttggtgatcatggcctggaatgccataaatgtacaaattgtttggatcaacgagag
ttggttgatattacaatagatgctcaaaaaatattatcctgtgtcaagcgaatgggagag
cgatttggtaaaggcctagttggtagagtattaactggatcaaaagataaaaaaattgaa
cagtggcatcttgatcaactgcctacttatggattattaaaagatcgaacacaaaaagaa
gttgttcagctaattgattatttaacagctaagggacaattgattgctacttctggacaa
tacccgattcttcaggtgtctcccttgggaatagaagttctgttaggaaaatgttctgtt
tttagaaaagaggatcaaaaagtacataaagtaattgacaatgatgaattatttgaaacg
cttagagaattacgtatggatttggcgcaaaaagcaaatgttcctccttatttggttttt
tctgatagtaccttaaaagaaatatgtgaaaagttacctaaaaatacgattcagttttta
caaattaaaggggttggccaaaataaactagataaatatggtgaactatttattaataaa
attaaggaattccaatcagaaaataaaatttga
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