Mycolicibacterium psychrotolerans: MPSYJ_19700
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Entry
MPSYJ_19700 CDS
T07008
Name
(GenBank) putative formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mpsc
Mycolicibacterium psychrotolerans
Pathway
mpsc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mpsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MPSYJ_19700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpsc03400
]
MPSYJ_19700
Enzymes [BR:
mpsc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MPSYJ_19700
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MPSYJ_19700
DNA repair and recombination proteins [BR:
mpsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MPSYJ_19700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
Ribosomal_S13
DUF7577
Motif
Other DBs
NCBI-ProteinID:
BBX68509
UniProt:
A0A7I7MAY2
LinkDB
All DBs
Position
1983288..1984154
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AA seq
288 aa
AA seq
DB search
MPELPEVEALADHLRRHAVGRTVGRVDVAALSVLKTFDPPLTALHGREVTGANRWGKYLG
LQAGDLHLITHLSRAGWLRWSDKLAATPLKPGKGPIALRVHLGTPGEAPVGFDLTEAGTQ
KRLAVWLVTDPMAVPQIASLGPDALSLTADGLADALRGNSGRIKTVITDQKVIAGIGNAY
SDEILHVAKLSPFATANKLTNAQLAALHAAMTDVLTDAVTRSVGQQAATLKGEKRSGLRV
HARTGLPCPVCGDTVREVSFADKSFQYCPTCQTGGKVLADRRLSKLLK
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgcccgaggtggaagccctggccgatcatctgcgccggcacgcggtcggc
cgaaccgtcggccgcgtcgacgtggccgcgctctcggtgctcaagacgttcgacccgccg
ctgacggcactgcacggtcgggaggtcaccggggcgaaccggtggggcaagtacctgggc
ttgcaggccggcgacctgcacctgatcacgcacctgtcccgcgcggggtggttgcgctgg
tcggacaaactcgccgcgaccccgctcaagccgggcaaggggcccatcgccctgcgcgtg
cacctcggcacgcccggtgaggctccggtgggcttcgacctcaccgaggccggcacccag
aagcggctggcggtgtggctggtgaccgatccgatggccgtcccgcagatcgcgtcgctg
ggcccggacgcgctgtccctgaccgccgacgggctggccgacgcgttgcggggcaactcc
gggcgcatcaagaccgtcatcaccgaccagaaggtgatcgcggggatcggcaacgcctac
agcgacgagatcctgcacgtggccaagttgtccccgttcgcgacggccaacaaactgacc
aacgcgcagctcgccgccttgcacgccgcgatgaccgacgtgctgaccgatgccgtcacg
cggtcggtcggtcagcaggccgccacgctcaagggggagaagcgctcgggtctgcgggtg
cacgcccgcaccggcctgccgtgcccggtgtgcggcgacaccgtgcgcgaggtgtcgttc
gccgacaagtccttccagtactgcccgacgtgtcagaccggcggcaaggtgctggccgac
cgtcggctgtccaagcttctcaagtag
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