Mycolicibacterium psychrotolerans: MPSYJ_24880
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Entry
MPSYJ_24880 CDS
T07008
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
mpsc
Mycolicibacterium psychrotolerans
Pathway
mpsc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpsc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MPSYJ_24880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpsc03021
]
MPSYJ_24880
03019 Messenger RNA biogenesis [BR:
mpsc03019
]
MPSYJ_24880
Transcription machinery [BR:
mpsc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MPSYJ_24880
Messenger RNA biogenesis [BR:
mpsc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MPSYJ_24880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
Fungal_virus_P2_C
S1CSD-TOTE-2
AAA_22
VWA_2
Motif
Other DBs
NCBI-ProteinID:
BBX69027
UniProt:
A0A7I7MB33
LinkDB
All DBs
Position
2499163..2501145
Genome browser
AA seq
660 aa
AA seq
DB search
MTDTDLITAGGGSDSDAMPTAVATDTPAAPAAAPARRGALTSLVLPELRAMAKEIGIEGA
SGMRKSELIAAIRERRGEKNSGAPAAEAAPSQPAPAADRAVEQAPAAAPPRRERRSASRE
QGGPDSPDQPKGRDDARPEAAEPAADSAVRKTDQGRGQGRQDNQGRQDNQGRQDNQGRQD
QSEKTERPARSQNDGGGRGQDNQRSGGQNDNQRAQNDNQRGGGQNDNQRGGGQNDNDDDG
GDRQGRRGRRFRDRRRRERGGEGGGGNDRDTELREDDVVQPVAGILDVLDNYAFVRTSGY
LAGPNDVYVSMNMVRKNGLRRGDAVTGAVRVPKDGDGGGQNARQKFNPLVRLDSVNGKPV
DEARKRPEFQKLTPLYPNTRLRLETTPDKLTTRVIDLIMPIGKGQRALIVSPPKAGKTTI
MQDIANAITRNNPECHLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPSDHTQAAELAI
ERAKRLVEDGKDVVVLLDSITRLGRAYNNASPASGRILSGGVDSTALYPPKRFLGAARNI
EEGGSLTIIATAMVETGSTGDTVIFEEFKGTGNAELKLDRKISERRVFPAVDVNPSGTRK
DELLLSSDEFAVVHKLRRVLSGLDPHQAIDLLMSQLRKTKNNYEFLVQVSKNTPGGNDHD
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
gtgactgatacggacctcatcacggctggcggcggctccgacagcgatgcgatgcccacc
gccgtggccacagacaccccggccgcgcccgccgcggccccagcgcgccgcggcgcgctg
accagcctcgtactgcctgaactgcgtgcgatggccaaggagatcggcatcgagggcgcg
tccgggatgcgcaagagcgagctgatcgcggcgatccgcgaacggcgcggcgagaagaac
agcggcgctccggccgccgaggccgctccgagccagccggctccggcggccgaccgtgcc
gtcgagcaggcgccggccgccgccccgccgcgtcgcgagcgacgctccgcctcccgcgag
cagggcggtcccgattctcccgaccagcccaagggccgcgacgatgcccgcccggaggcc
gccgaaccggcggccgactccgcggtgcgcaagaccgaccagggtcgcggccagggtcgc
caggacaatcagggtcgccaagacaaccagggtcgccaggacaaccagggtcgccaggac
cagtccgagaagaccgaaaggcccgcccgcagccagaacgacggcggcggccgcggtcag
gacaatcagcgcagcggcggtcagaacgacaaccagcgcgctcagaacgacaaccagcgc
ggcggcggtcagaacgacaaccagcgcggcggcgggcagaacgacaacgacgacgacggt
ggcgaccggcagggtcgtcgcggccgccggttccgtgatcgccggcgccgtgagcgcggc
ggtgaaggcggcggcgggaacgaccgcgacaccgagctgcgcgaggacgacgtcgttcag
ccggtggccggcatcctcgacgtgctcgacaactacgcgttcgtccgtacctccgggtac
ctggcggggccgaacgacgtgtacgtgtcgatgaacatggtgcgcaagaacggtctgcgc
cgcggcgacgcggtgaccggtgcggtgcgcgtccccaaggacggcgatggcgggggacag
aacgcccggcagaagttcaacccgctggtgcggctcgactcggtcaacggcaagccggtg
gacgaagcccggaagcggcccgagttccagaagctcactccgctgtacccgaacacgcgt
ctgcgcctggagaccactcccgacaagctgaccacccgcgtgatcgacctgatcatgccg
atcggcaagggccagcgagccctgatcgtgtcgccgcccaaggccggtaagaccacgatc
atgcaggacatcgccaacgcgatcacccgcaacaatcccgaatgccacctgatggtcgtg
ctcgtcgacgagcgaccagaagaggtcaccgacatgcagcgctcggtgaagggtgaggtc
atcgcctcgaccttcgaccggccgccgtcagaccacacgcaggccgccgagctggccatc
gaacgggccaagcgcttggtcgaggacggcaaggacgtcgtcgtgcttttggactcgatc
acccgcctgggtcgcgcctacaacaacgcctccccggcgtcgggccgtatcctctccggc
ggtgtcgactcgaccgcgctgtacccgccgaagcgattcctcggcgcggcacgcaacatc
gaggagggtggctcgctgacgatcatcgccacggccatggtcgagacgggctccacgggc
gacacggtcatcttcgaggagttcaaaggcacgggtaacgccgagctcaagctggaccga
aagatctccgagcgccgggtgttccccgcggtcgacgtcaacccgtcgggcacccgcaag
gacgagctgctgctctccagcgacgagttcgccgtcgtgcacaagctgcgtcgggtgctg
tcggggctggatccgcatcaggccatcgacctgctgatgagtcagctgcgcaagaccaag
aacaactacgagttcctggttcaggtgtcgaagaacacccccggcggcaacgaccacgac
tga
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