KEGG   Mycolicibacterium psychrotolerans: MPSYJ_37090
Entry
MPSYJ_37090       CDS       T07008                                 
Name
(GenBank) RNA polymerase sigma factor SigF
  KO
K03090  RNA polymerase sigma-B factor
Organism
mpsc  Mycolicibacterium psychrotolerans
Brite
KEGG Orthology (KO) [BR:mpsc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mpsc03021]
    MPSYJ_37090
Transcription machinery [BR:mpsc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     MPSYJ_37090
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 MarR_2 MarR HTH_23 Sigma70_ECF HTH_Crp_2 HTH_20 HTH_3 HTH_24 HTH_37 HTH_10 DUF134 HTH_31 IF2_N DUF7343 Phage_antitermQ
Other DBs
NCBI-ProteinID: BBX70248
UniProt: A0A7I7MDA2
LinkDB
Position
complement(3788492..3789280)
AA seq 262 aa
MTTRDADGCELHEAFVRMHELSEGSEERERLRTHIIEQCLPIAERIARRYDRRGETHDDL
VQVARVGLLNAVNRFDPTAGNEFLSYAIPTMLGEVKRYFRDCSWSVNVPRRLKDLYPALG
PLTAELTQRLGRSPTAGELAEALGVDRGEVVETLTAAAGFKPRSLDYSTARDEDEGPTLA
DRLGQPDPGIGFVEDRDALRAQLDTLPERENRIVVMRFFESLTQSEIAERMGISQMHVSR
LLAQSLRRMRDGMLDTPRAHVA
NT seq 789 nt   +upstreamnt  +downstreamnt
atgaccacacgcgacgccgacggttgcgagctacacgaagcgttcgtgcggatgcacgag
ctttcggagggatcggaggagcgggagcgactgcgcacccacatcatcgagcagtgcctg
ccgatcgccgagcggatcgcgcgccgctacgaccgacggggcgagacccacgacgatctg
gttcaggtggcgcgggtggggctgttgaacgccgtgaaccgcttcgacccgaccgcgggc
aacgagttcctgtcctatgcgatcccgaccatgctcggcgaggtcaagcgctacttccgc
gactgcagctggtcggtcaacgtcccgcgccggctcaaggacctctatccggcactcggt
ccgctcaccgccgagctgacccagcggctcggccggtcgccgaccgcgggcgaactggcc
gaggcactgggcgtcgaccgcggcgaagtcgtcgaaacactgaccgccgctgcgggattc
aagccacgctcactggactacagcacggcgcgcgacgaagacgagggtcccacgctcgcc
gaccggctgggccagcccgatcccggtatcgggttcgtcgaggaccgcgacgctctgcgc
gcccagctcgacacactgcccgagcgggagaaccggatcgtggtgatgcggttcttcgaa
tcgctgacccagtcggagatcgccgagcggatgggcatctcgcagatgcacgtgtcgcgg
ctgctggcccagtccctgcgccggatgcgtgacgggatgctggacacaccgcgggcgcac
gtggcgtaa

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