Mycolicibacterium psychrotolerans: MPSYJ_38330
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Entry
MPSYJ_38330 CDS
T07008
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mpsc
Mycolicibacterium psychrotolerans
Pathway
mpsc03030
DNA replication
mpsc03410
Base excision repair
mpsc03420
Nucleotide excision repair
mpsc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MPSYJ_38330
03410 Base excision repair
MPSYJ_38330
03420 Nucleotide excision repair
MPSYJ_38330
03440 Homologous recombination
MPSYJ_38330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpsc03032
]
MPSYJ_38330
03400 DNA repair and recombination proteins [BR:
mpsc03400
]
MPSYJ_38330
Enzymes [BR:
mpsc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MPSYJ_38330
DNA replication proteins [BR:
mpsc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MPSYJ_38330
DNA repair and recombination proteins [BR:
mpsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MPSYJ_38330
NER (nucleotide excision repair)
GGR (global genome repair) factors
MPSYJ_38330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
NYN_YacP
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
BBX70372
UniProt:
A0A7I7MER7
LinkDB
All DBs
Position
complement(3929217..3931964)
Genome browser
AA seq
915 aa
AA seq
DB search
MDPVSAPVPRVKAVSPAKTASVTDEKPTLMLLDGNSLAFRAFYALPAENFKTQGGLTTNA
VYGFTAMLINLLRDEQPSHIAAAFDVSRQTFRKEKYPEYKEGRSATPDEFRGQIDITKEV
LGALGITVLAEPGFEADDIIATLATQAENEGYRVLVVTGDRDSLQLVSDDVTVLYPRKGV
SELTRFTPDAVVEKYGLTPTQYPDFAALRGDPSDNLPGIPGVGEKTATKWIAEYGSLQAL
VDNVDKVKGKVGDALRAHLSSVVLNRELTDLVKEVPLAQTPDTLRMQPWNRDQIHRLFDD
LEFRVLRDRLFDTLASADPEVDEGFEVRGEALQPGTLAAWLAEHSDGRRSGLAVVGNHLA
FDSDATAIAIVAPDGEGRYLDTATLDPGDEAALVSWLADPAQPKALHEAKLAMHDLEGRG
WPVAGVTSDTALAAYLVRPGQRSFTLDDLSLRYLKRELRADNPEQQQLSLLDDSDGVDDQ
AVQTLLLRASAVMDLADALDEELARIDSSALLGSMELPVQRVLADLETAGIAVDLDTLTE
LQSEFAGQIRDAAEAAYTVIGKQINLGSPKQLQVVLFDELEMPKTKRTKTGYTTDADAVQ
SLFEKTGHPFLQHLLAHRDATRLKVTVDGLLNSIASDGRIHTTFNQTIAATGRLSSTEPN
LQNIPIRTEAGRRIRDAFVVGAGYAELMTADYSQIEMRIMAHLSQDAGLIEAFNTGEDLH
SFVASRAFDVPIDEVTPDLRRRVKAMSYGLAYGLSAYGLAAQLKISTEEAKVQMDQYFAR
FGGIRDYLRDVVDQARKDGYTSTVFGRRRYLPELDSSNRNVREAAERAALNAPIQGSAAD
LIKVAMINVDSAIKEAGLSSRMLLQVHDELLFEVVDGEREALEALVREHMGNAYPLNVPL
EVSVGYGRSWDAAAH
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggatccggtgtcggccccggtgcctagagtgaaggccgtgagcccagccaagaccgcg
tcggtgaccgacgagaagcccaccttgatgctgctggacggcaactcgctggcgttccgc
gcgttctatgcgctgccggccgagaacttcaagacccagggcgggctgaccaccaacgcg
gtctacgggttcaccgccatgctcatcaacctgctgcgcgacgagcagccgagccacatc
gccgccgccttcgacgtctcccggcagaccttccgcaaggagaagtacccggagtacaag
gagggccggtcggccacgcctgacgagttccgtggccagatcgacatcacgaaagaggtg
ctcggggcgctgggcatcacggtgctcgcagagccgggcttcgaggccgacgacatcatc
gccacgctggccacccaggccgagaacgagggttaccgggtgctggtggtcaccggggac
cgtgactcactgcagctggtcagcgacgacgtcaccgtgctctacccccgcaagggggtc
agcgaactgacccggttcaccccggacgccgtggtcgagaagtacgggctgacgccgacg
cagtaccccgatttcgcggcgttgcgcggggaccccagcgacaatctgccgggcatcccg
ggggtcggcgagaagaccgccaccaagtggatcgccgagtacggctcgctgcaggcgctg
gtcgacaacgtggacaaggtcaagggcaaggtcggtgacgcgctgcgcgcgcacctgtcc
agtgtggtgctcaaccgggagctgaccgacctggtcaaggaggtgccgctggcgcagacg
cccgacacgctgcggatgcagccgtggaaccgggaccagatacaccggctgttcgacgac
ctggagttccgggtgctgcgggaccggctgttcgacacgctcgcctcggccgaccccgaa
gtcgacgagggtttcgaggtccgcggggaggcgctgcagccagggacgctggcggcgtgg
ctcgccgagcacagtgacgggcgccggtccgggctggccgttgtgggcaaccatctcgcc
ttcgacagcgacgccaccgcgatcgccatcgtcgcgcccgacggcgaggggcggtacctc
gacaccgccacccttgacccgggcgacgaggccgcgctggtgtcgtggctcgccgacccc
gcccagcccaaggcgctgcacgaggcgaagctcgccatgcacgatctggaaggtcgggga
tggccggtggcgggtgtcacctccgacaccgcgctggccgcctacctggtgcggcccggc
cagcgcagcttcaccctcgacgatctgtccctgcgctacctgaagcgcgaactgcgcgcg
gacaaccctgagcaacaacaactctcgctgctcgatgactccgatggcgtggacgatcag
gccgtgcagacgctgctgctgcgcgccagcgcggtgatggacctcgccgacgcgctcgac
gaggagctcgcccggatcgactcctcggccctgctgggcagcatggagctccccgtccag
cgggtcctggccgatctcgaaaccgcgggcatcgccgtcgatctggacacactcaccgaa
ctgcagagtgagttcgccggccagatccgcgacgccgccgaggccgcgtacacggtgatc
ggcaagcagatcaatctcggctcaccgaaacagctccaggtggtgctcttcgacgagctg
gagatgccgaagaccaaacggaccaagaccggctacaccacggacgccgacgctgtgcag
agcctgttcgagaagaccggtcacccgtttcttcagcatctgctcgcgcaccgggacgcc
acccgtctgaaggtcaccgtcgacggcctgctcaactccatcgcctccgacggccgcatt
cacaccacgttcaaccagacgatcgcggccaccggacggctgtcctcgaccgagccgaat
ctgcagaacatcccgatccgcaccgaggccggacggcggatccgcgacgctttcgtcgtc
ggcgccggctacgcggagttgatgaccgcggactacagccagatcgagatgcgcatcatg
gcgcacctgtcgcaggacgcgggcctgatcgaagccttcaacaccggcgaggatctgcat
tcgttcgtcgcgtcgcgggcgttcgacgtcccgatcgacgaggtgacgccggatcttcga
cggcgtgtgaaggccatgtcctacgggctggcctacggcctgagtgcctacgggctcgcg
gcgcagttgaagatctccaccgaagaggccaaggtccagatggaccagtacttcgcgcgt
ttcggcggcatccgcgactacctgcgcgacgtcgtcgatcaggcccgcaaggacggctac
acctccacagtgttcgggcgcaggcgctacctccccgaactcgacagcagcaaccgcaac
gtgcgcgaggcggccgagcgcgccgcgctcaacgcaccgattcagggcagcgcggccgac
ctcatcaaggtcgcgatgatcaacgtcgactccgcgatcaaggaggcggggctgtcgtcg
cgaatgttgttgcaggtgcacgacgaactcctgttcgaggtcgtggacggagagcgggag
gccctcgaagccctggtgcgcgaacacatgggcaacgcctacccgctcaacgtgcccctc
gaggtctcggtgggctacggccgcagctgggatgcggccgcgcactga
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