Mycolicibacterium psychrotolerans: MPSYJ_39140
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Entry
MPSYJ_39140 CDS
T07008
Symbol
dnaE1
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mpsc
Mycolicibacterium psychrotolerans
Pathway
mpsc03030
DNA replication
mpsc03430
Mismatch repair
mpsc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MPSYJ_39140 (dnaE1)
03430 Mismatch repair
MPSYJ_39140 (dnaE1)
03440 Homologous recombination
MPSYJ_39140 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpsc03032
]
MPSYJ_39140 (dnaE1)
03400 DNA repair and recombination proteins [BR:
mpsc03400
]
MPSYJ_39140 (dnaE1)
Enzymes [BR:
mpsc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MPSYJ_39140 (dnaE1)
DNA replication proteins [BR:
mpsc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MPSYJ_39140 (dnaE1)
DNA repair and recombination proteins [BR:
mpsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MPSYJ_39140 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
BBX70453
UniProt:
A0A7I7MFX8
LinkDB
All DBs
Position
complement(4012065..4015601)
Genome browser
AA seq
1178 aa
AA seq
DB search
MSGSFVHLHNHTEYSMLDGAAKVKPMLAEAQRLEMPAIGMTDHGNMFGASEFYNAATDAG
ITPIIGVEAYIAPASRFETKRVLWGDPSQKSDDVSGSGSYTHMTMVAENATGLRNLFKLS
SLASFEGQLGKWSRMDAEIIAEHAEGIIATTGCPSGEVQTRLRLGHRQEALEAAAKWREI
FGPENFFLELMDHGLDIERRVREGLLEIGQKLGIPPLATNDCHYVTRDASRNHEALLCVQ
TGKTLSDPTRFKFDGDGYYLKSAAEMRALWDDQVPGACDSTLLIAERVQSYADVWSVRDR
MPIFPVPDGHDQASWLRHEVMAGLERRFPGSVGQDYLDRAEYEIKVICDKGFPSYFLIVA
DLINYAKSVDIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAPDIDID
FDDRRRGEMLRYAANKWGSDRVAQVITFGTIKTKAALKDSARVNYGQPGFAIADRITKAL
PPPIMAKDIPLSGITDPSHERYKEAAEVRSLIDTDPDVRTIYETARGLEGLVRNAGVHAC
AVIMSSEPLIEAIPLWRRPQDGAVITGWDYPSCEAIGLLKMDFLGLRNLTIIGDCIENIK
ANRGVDVDLESLALDDPKAYELLGRGDTLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLAL
YRPGPMGMNAHNDYADRKNGRQAIKPIHPELEEPLKEILSETYGLIVYQEQIMFIAQKVA
SYTMGKADALRKAMGKKKLEVLEAEYKGFREGMTANGFSEGAVKALWDTILPFAGYAFNK
SHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVLPPDVNE
SVQNFASVGDDIRFGLGAVRNVGANVVASLVKTRTEKGKYTDFSDYLNKIDIAACNKKVT
ESLVKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGSEDGASDAVFTI
KVPEDEWEDKHKLALEREMLGLYVSGHPLNGIAHLLAAQVDTQIPAILDGDVANDTQVRV
GGILASVNRRVNKNGLPWASAQIEDLTGGIEVLFFPQTYSMFGAEIADDVVVLIGAKVAI
RDDRISLIANELIVPDFSSAQVNRPVAVSLPTRQCTVDKVSALKQVLARHPGTAQVHLRL
ISGERITTLELDQSLRVTPSSALMGDLKELLGPGCLGG
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggtcattcgtgcatctccacaaccacaccgagtactcgatgctcgacggtgcc
gcgaaggtcaagccgatgctcgccgaggcgcagcgcctcgagatgcccgcaatcggcatg
accgatcacggaaacatgttcggcgccagcgagttctacaacgcggccaccgacgcgggc
atcacgccgatcatcggcgtcgaggcctacatcgcaccggcgtcgcgattcgagaccaag
cgggtgctgtggggcgatcccagccagaagtccgacgacgtgtcgggcagcggctcgtac
acccacatgacgatggtggccgagaacgcgaccggtctgcgcaacctgttcaagctctcg
tcgctggcgtcgttcgagggccagctcggcaagtggtcccggatggacgccgagatcatc
gccgagcatgccgagggcatcatcgccaccaccggctgtccgtcgggtgaggtgcagacc
cggctgcggctcggccaccgccaggaggcgctcgaggcggcggccaagtggcgggagatc
ttcggtccggagaacttcttcctcgagctgatggaccacgggctcgacatcgagcgccgg
gttcgggagggcctgctcgagatcgggcagaagctgggcatcccgccgttggccaccaac
gactgccactacgtcacccgcgacgcctcgcgcaaccacgaggcgctgctgtgcgtgcag
acgggcaagacactctcggacccgacccgcttcaagttcgacggtgacggctactacctc
aagtccgctgccgagatgcgcgccctgtgggacgaccaggtgcccggcgcgtgcgactcc
acgctgctgatcgccgagcgggtgcagtcctacgccgacgtctggtcggtccgcgaccgc
atgccgatcttcccggtgcccgacgggcacgaccaggcgtcgtggctgcgccacgaggtg
atggcggggctggaacggcgcttccccggttcggtcgggcaggactacctcgaccgcgcc
gagtacgagatcaaggtcatctgcgacaagggttttccgtcctacttcctgatcgtcgcc
gatctgatcaactacgcgaagtcggtcgacatccgggtcggccccgggcgcgggtcggcc
gccggttcgctggtggcctacgcgctggggatcaccaacatcgacccgatcccgcacggc
ctgctgttcgagcggttcctcaacccggaacggccgtcggcgcccgacatcgacatcgac
ttcgacgaccggcggcgcggtgagatgctgcgctacgcggcgaacaagtggggcagcgac
cgcgtcgcccaggtcatcaccttcggcaccatcaaaacgaaagccgcgctgaaggattcg
gcgcgcgtcaactacggccagccgggcttcgcgatcgccgaccggatcaccaaggcgctg
ccgccgccgatcatggccaaggacatcccgctgtcgggcatcaccgaccccagccacgag
cggtacaaggaagccgccgaggtgcggagtctgatcgacaccgaccccgacgtccgcacg
atctacgagaccgcccgcggtctggagggtctggtccgcaacgccggcgtgcacgcgtgc
gcggtgatcatgagctcggagccgctgatcgaggcgatcccgctgtggcgccggccgcag
gacggcgccgtgatcaccggttgggactatccgtcgtgcgaggccatcggcctgctcaag
atggacttcctcgggctgcggaacctgacgatcatcggcgactgcatcgagaacatcaag
gccaaccgcggggtcgatgtcgacctggagtcgctggccctcgacgatccgaaggcctac
gagttgctgggccgcggtgacacccttggggtgttccagctcgacggcgggccgatgcgc
gatctgctgcgccgcatgcagccgaccgagttcaacgacatcgtggccgtgctggcgctg
taccggccgggcccgatgggcatgaacgcccacaacgactacgccgaccgcaagaacggc
cggcaggcgatcaaaccgatccaccccgagctcgaggagccgctcaaggagatcctctcc
gagacctacggcctgatcgtctaccaagagcagatcatgttcatcgcccagaaggtcgcc
tcgtacacgatgggcaaggccgacgcgctgcgcaaggccatgggcaagaagaagctcgag
gtgctcgaggcggagtacaagggcttccgcgagggcatgaccgccaacggattctccgag
ggcgcggtgaaagcgttgtgggacaccatccttccgttcgccgggtacgcgttcaacaag
tcgcacgctgccggctacgggttggtgtcctactggacggcctacctgaaggccaactat
ccggccgagtacatggcaggtctgctcacctccgtcggtgacgacaaggacaaggccgcg
gtctacctcgccgactgccggcggctcggtatcacggtgctgccgccggatgtcaacgag
tcggtgcagaacttcgcctccgtcggcgacgacatccgcttcggcctcggggctgtgcgc
aacgtcggcgccaatgtcgttgcctcactggtgaagacgcgcacggagaagggtaagtac
accgacttctcggactacctgaacaagatcgacatcgccgcctgcaacaagaaggtgacg
gagtcgctggtcaaggcgggcgccttcgactcgctcggccacccgcgcaagggcctgttc
ctggtgcacaccgacgccgtcgactcggtgctcggcaccaagaaggccgaggcgatgggg
cagttcgacctgttcggcggcggctcggaggacggcgcctccgacgcggtcttcacgatc
aaggtgcccgaggacgagtgggaggacaagcacaagctcgccctcgagcgcgagatgctg
ggtctgtacgtgtccggccacccgctcaacgggatcgcgcacctgctcgccgcgcaggtc
gacacccagatcccggcgattctcgacggggacgtcgccaacgacacccaggtccgcgtc
ggcggaatcctcgcgtcggtgaaccggcgcgtcaacaagaacggtctgccctgggcgtcg
gcgcagatcgaagacctcaccggcggcatcgaggtgctgttcttcccgcagacgtactcg
atgttcggcgccgagatcgccgacgacgtggtggtgctgatcggggccaaggtggcgatc
cgcgacgaccggatctcgctgatcgccaacgagctgatcgtgccggacttctccagcgcc
caggtcaaccggcccgtcgcggtcagcctgccgacgcggcagtgcaccgtcgacaaggtc
agcgcgctcaagcaggtgctggcgcggcatcccggcaccgcacaggtgcatctgcggctg
atcagcggggagcggatcaccacgctggagctcgatcagtccctgcgggtgacgccgtcc
tcggcgctgatgggcgacctcaaggagctgttgggccccggctgcctgggcgggtga
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