Mycolicibacterium psychrotolerans: MPSYJ_41660
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Entry
MPSYJ_41660 CDS
T07008
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
mpsc
Mycolicibacterium psychrotolerans
Brite
KEGG Orthology (KO) [BR:
mpsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpsc03021
]
MPSYJ_41660
Transcription machinery [BR:
mpsc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MPSYJ_41660
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_Crp_2
KORA
MarR_2
HTH_3
T3SS_needle_E
MarR
HTH_23
HTH_10
HTH_33
DUF1492
DUF7343
Motif
Other DBs
NCBI-ProteinID:
BBX70705
UniProt:
A0A7I7MET9
LinkDB
All DBs
Position
4282667..4283389
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AA seq
240 aa
AA seq
DB search
MFRELALLDEDSAAYRRMREAIIERCLPLAEHIARRFRGRGESHDDLVQVARVGLLNAVN
RFDIDTADDFLAFAVPTMMGEVRRYFRDHGWSLKVPRRLKELNMRLKAARSELTQQLNRA
PSPSELAEYLGLEREEVVEGLIAADAYSTRSTEQELSAAGDGLTMIDTLGGPDPNLQKVV
DVHTVRPLIAGLPERDRMVLKMRFFDNKTQSQIADEIGVSQMHVSRLLARALATIREKAS
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcgaactcgccctgctggacgaggactccgcggcgtaccggcggatgcgggaa
gccatcatcgaacggtgcctcccgctggccgagcacatcgcccggcgattccgcgggcgt
ggcgaatcccacgacgacctcgttcaggtcgcgcgtgtgggcctgctcaacgcggtcaac
cgattcgacatcgacaccgccgacgacttcctcgccttcgcggtccccaccatgatgggt
gaggtccgccgctacttccgcgaccacgggtggtcgctgaaggttccgcggcgcctcaag
gaactcaacatgcggctcaaggccgcccggtccgaactgacccagcagctcaaccgtgcg
ccgtctcccagcgaactcgccgagtacctcggcctggaacgggaggaagtcgtcgaggga
ctcatcgcagccgacgcctattcgacgcgctccaccgaacaggagctcagcgccgccggc
gacggtctgacgatgatcgacaccttgggtggacccgatcccaacctgcagaaggtggtc
gacgtccacaccgtgcgaccgctgatcgccggtctgcccgaacgggaccggatggtgctg
aaaatgcgtttcttcgacaacaagacgcagtcccagatcgccgacgagatcggcgtctcc
cagatgcacgtgtcccgtctcctggcgcgcgcattggccacgatccgcgagaaagccagc
tga
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