Mycolicibacterium psychrotolerans: MPSYJ_50590
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Entry
MPSYJ_50590 CDS
T07008
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
mpsc
Mycolicibacterium psychrotolerans
Brite
KEGG Orthology (KO) [BR:
mpsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpsc03021
]
MPSYJ_50590
Transcription machinery [BR:
mpsc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MPSYJ_50590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_24
HTH_Crp_2
MarR
Sigma70_ECF
HTH_3
MarR_2
DUF7343
HTH_IclR
KORA
HTH_31
Motif
Other DBs
NCBI-ProteinID:
BBX71598
UniProt:
A0A7I7MHB4
LinkDB
All DBs
Position
complement(5202310..5203044)
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AA seq
244 aa
AA seq
DB search
MADMFRELEKLEEGSATFQRQRDRIVERCLPLADHIARRFDGRGEPRDDLVQVARVGLVN
AVIRFDVNAGSDFVSFAVPTIMGEVRRHFRDNSWSVKVPRRLKELHLRLGAATADLSQRL
GRAPTATELAAELEMDRDEVIEGLVAGSSYNTLSIDSGGSGGNEDAPAIADTLGDMDMSL
DQIENREALRPLLEALPERERTVLVLRFFESMTQTQIAERVGISQMHVSRLLAKSLTRLR
DQLQ
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
gtggccgacatgttccgagagttggagaaactcgaagaagggtcggcgacgttccagcgc
cagcgcgaccgcatcgtcgaacgctgccttccgctggccgaccacatcgcccgccgattc
gacggccgcggcgaaccccgcgacgacctcgtgcaggtcgcgcgcgtcggtctggtgaac
gccgtcatccgcttcgacgtcaacgccggctccgacttcgtctcgttcgcggtgccgacc
atcatgggcgaggtccgtcgccacttccgcgacaacagctggtcggtcaaggtgccccgc
cggctcaaggaactccacctgcgtctcggtgctgcgaccgccgacctctcccagcggctg
ggtcgcgcgccgaccgccaccgagctcgccgccgaactggagatggaccgcgacgaggtc
atcgagggcctggtcgcgggcagctcctacaacacgctgtcgatcgacagcggaggcagc
ggcggcaacgaggacgcgcccgccatcgcggacacgctcggcgacatggacatgagcctc
gaccagatcgagaaccgcgaggcgctgcgcccgctgctggaggctctgcccgagcgggag
cgcaccgtgctggtgctgcggttcttcgagtcgatgacgcagacgcagatcgccgagcgg
gtcggcatctcgcagatgcacgtctcccggctgctggcgaagtcgctaactcgtctgcgg
gatcagcttcagtag
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integrated database retrieval system
