Mycolicibacterium psychrotolerans: MPSYJ_52860
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Entry
MPSYJ_52860 CDS
T07008
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mpsc
Mycolicibacterium psychrotolerans
Pathway
mpsc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mpsc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MPSYJ_52860 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpsc03021
]
MPSYJ_52860 (rpoA)
03400 DNA repair and recombination proteins [BR:
mpsc03400
]
MPSYJ_52860 (rpoA)
Enzymes [BR:
mpsc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MPSYJ_52860 (rpoA)
Transcription machinery [BR:
mpsc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MPSYJ_52860 (rpoA)
DNA repair and recombination proteins [BR:
mpsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MPSYJ_52860 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
BBX71825
UniProt:
A0A7I7MI53
LinkDB
All DBs
Position
complement(5461517..5462569)
Genome browser
AA seq
350 aa
AA seq
DB search
MLISQRPTLSEEVIAEDRSQFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKGLVVSSEEDEPVTMYLRKQGPGEVTAGDIVPPAGVTVHN
PDMHIATLNEKGKLEVELVVERGRGYVPAVQNKASGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLILDVETKSSISARDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADHIASFALPIDDLDLTVRSYNCLKREGVHTVGELVARTESDLLDIRNFGQKSIDEVKIK
LHQLGLSLKDSPASFDPSEVAGYDVATGTWNSDAGYDVDDSQDFAETEQL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgctgatttctcagcgccccaccctgagcgaagaggtcatcgccgaggaccgctcccag
ttcgtcatcgaaccgctggagcccggattcggctacaccctcggaaactcgctgcgccgc
acgctgctgtcgtccatcccgggcgcggccgtcaccagcatccgcatcgacggtgtgctg
cacgagttcaccacggtgcccggggtcaaggaagacgtcaccgacatcatcctgaacctc
aagggtctcgtcgtgtcctccgaggaggacgagcccgtcaccatgtacctgcgcaagcag
ggtcccggtgaggtcaccgcgggcgacatcgtcccgccggccggggtcaccgtgcacaac
ccggacatgcacatcgcgacgctgaacgagaagggcaagctcgaggtcgagctcgtcgtc
gagcgtggtcgcggctacgtgcccgccgtgcagaacaaggcgtccggcgcggagatcggc
cgtatcccggtcgattccatctactcgccggtgctcaaggtgacctacaaggtcgaggcc
acccgtgtcgagcagcgcaccgacttcgacaagctgatcctcgatgtcgagaccaagagc
tccatcagcgcgcgtgacgcgctcgcctcggcgggcaagacgctggtcgagttgttcggt
ctggcaagggaactcaacgtcgaggccgagggcatcgagatcgggccgtcgccggccgag
gccgatcacatcgccagcttcgcgctgccgatcgacgacctggacctgacggtgcgctcg
tacaactgcctcaagcgcgagggcgtgcacaccgtgggcgagctcgtggcccgcacggag
tccgacctgctggacatccgcaacttcggccagaagtccatcgacgaggtgaagatcaag
ctgcaccagctcggcctgtcgctcaaggacagcccggcgagcttcgatccgtccgaggtc
gccggctacgacgtcgcaaccggcacctggaacagcgatgccggctacgacgtggacgac
agccaggacttcgccgaaaccgaacagctctaa
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