Mycolicibacterium psychrotolerans: MPSYJ_53280
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Entry
MPSYJ_53280 CDS
T07008
Symbol
rmlB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
mpsc
Mycolicibacterium psychrotolerans
Pathway
mpsc00521
Streptomycin biosynthesis
mpsc00523
Polyketide sugar unit biosynthesis
mpsc00525
Acarbose and validamycin biosynthesis
mpsc00541
Biosynthesis of various nucleotide sugars
mpsc01100
Metabolic pathways
mpsc01110
Biosynthesis of secondary metabolites
mpsc01250
Biosynthesis of nucleotide sugars
Module
mpsc_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
mpsc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
MPSYJ_53280 (rmlB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
MPSYJ_53280 (rmlB)
01055 Biosynthesis of vancomycin group antibiotics
MPSYJ_53280 (rmlB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
MPSYJ_53280 (rmlB)
00525 Acarbose and validamycin biosynthesis
MPSYJ_53280 (rmlB)
Enzymes [BR:
mpsc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
MPSYJ_53280 (rmlB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
NmrA
adh_short
Sacchrp_dh_NADP
KR
Motif
Other DBs
NCBI-ProteinID:
BBX71867
UniProt:
A0A7I7MJA1
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Position
5499388..5500383
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AA seq
331 aa
AA seq
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MRLLVTGGAGFIGANFVHATVRECRDVRVTVLDAFTYAGSRESLAPVHDDVRLVEGDITD
AALVEKLVTESDAVVHFAAETHVDNALADPEPFVRSNVLGTFTVLEAVRRNNVRLHHIST
DEVYGDLPLGDPVRFTEATPYNPSSPYSSTKAASDMLVRAWVRSYGVAATLSNCSNNYGP
YQHVEKFIPRQITNILTGRRPRLYGAGANVRDWIHVEDHNSAVWRILTDGAIGRTYLIGA
DGERDNLTVMRTILRLMDRSPDDFDHVTDRAGHDLRYAIDPSPLRDELGWAPSHTDFEAG
LRDTIAWYRDNESWWAPLKDAVEARYRVREG
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcgattgctggtcaccggaggcgccggcttcatcggcgccaacttcgtccatgccacg
gtgcgggaatgccgcgacgtgcgtgtcacggtgctcgacgcgttcacctacgcgggtagc
cgcgagtcgttggccccggtgcacgacgacgtgcggttggtcgaaggcgacatcaccgac
gccgcgctcgtcgagaagctcgtcaccgagtccgacgccgtcgtgcacttcgccgccgag
acccacgtcgacaacgccctggccgacccggaaccgttcgtccggtcgaacgtgctgggc
accttcacggtgctcgaagcggtgcggcgcaacaatgttcggctgcaccacatctcgaca
gacgaggtgtacggcgacctgccgctgggcgatccggtccgattcaccgaggcgacgccg
tacaacccgtcgagcccgtactcgtcgaccaaggccgcctccgacatgctggtgcgcgcc
tgggtgcgctcctacggcgtggccgcgacactgtcgaactgctcgaacaactacggcccg
tatcagcatgtggagaagttcatcccgcgccagataaccaacatcctgaccgggcgtcgg
cccaggctctacggggccggggccaacgttcgcgactggatccacgtcgaggaccacaac
agcgcggtgtggcgcatcctgaccgacggcgcgatcggccgcacatatctgatcggcgcc
gatggtgagcgggacaacttgacggtgatgcgcacgatccttcggctgatggaccggtcc
cccgacgactttgaccacgtcaccgatcgcgccgggcacgacctgcggtatgcgatcgac
ccgtcgccgctgcgcgacgagctgggctgggccccgtcgcacaccgacttcgaggcgggg
ttgcgcgacaccatcgcgtggtaccgggacaacgaatcctggtgggcgcctttgaaggac
gcggtggaggcgcgctaccgggtgcgtgagggatga
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