Mycobacterium pseudoshottsii: MPSD_05970
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Entry
MPSD_05970 CDS
T07300
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mpse
Mycobacterium pseudoshottsii
Pathway
mpse03030
DNA replication
mpse03430
Mismatch repair
mpse03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MPSD_05970
03430 Mismatch repair
MPSD_05970
03440 Homologous recombination
MPSD_05970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpse03032
]
MPSD_05970
03400 DNA repair and recombination proteins [BR:
mpse03400
]
MPSD_05970
Enzymes [BR:
mpse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MPSD_05970
DNA replication proteins [BR:
mpse03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MPSD_05970
DNA repair and recombination proteins [BR:
mpse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MPSD_05970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
TerB
DUF4031
BRCT
Rv2179c-like
Tic110
RhodobacterPufX
DUF533
Motif
Other DBs
NCBI-ProteinID:
BBA86305
LinkDB
All DBs
Position
645033..646253
Genome browser
AA seq
406 aa
AA seq
DB search
MAGFAVLDFETTGFAAEYDRVVEVGLVLLSAEGDIEDEWSTLINPHRDVGATERHGIRAR
DVLGAPAFEAIIPRLLRDLRGRVFVAHNVNFDQRFLLAELRRAGVPLDNPWLTGLCTMRW
AGRLLPAASRKLPDCCDAAGVVLTDAHRALADARATASLLKYLIDHCGSPPPWAKEIDGA
EDFEWPQVAGPEVRLVTRAAWGAAPPRPPAGWLDRIVARMPHEDDPRVESYLEILESALL
DCYLSCHEEDALVEMADSLGLSRRLLDEIHHDYLRSMARVAVADGVVTDDERADLLQVAE
LLGLSADRVDAALAMASARSACAEFALAAGDVLCLTGSMRRRRSEWEAELAQRGIEVGSL
TRRTRLLVAADPDSATGKARKARKYGIPIINEDALSRLLGARTSGE
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
gtggccggttttgccgtcctggacttcgagaccaccggattcgccgccgagtacgaccgt
gtggtcgaggttggcctcgtgctgctgtcggcggagggggacatcgaggacgagtggtca
actctgatcaatcctcatcgcgatgttggtgctaccgagaggcatggaatccgggcgcgt
gacgtactcggcgcgcccgccttcgaggcgatcatcccgaggttgttacgggacctccgt
gggcgggttttcgtggcccacaacgtcaactttgatcagcgatttttgctggcagagttg
cgtcgggccggagtgccgttggataacccgtggctgaccggattgtgcacgatgaggtgg
gccggtcgcctgcttccggctgcgtcgcggaagctgccggattgttgcgatgccgctggc
gtcgtcctcactgacgcccatcgcgcgctcgcagatgcccgggctacggcgagtctgctg
aagtacctcatcgaccattgcgggagcccgccgccgtgggctaaggagatagacggcgcc
gaggactttgagtggccgcaggtggccggcccggaagtgcggttggtgacgcgcgcggcg
tggggggcagcgcctccacgtcccccggcagggtggcttgatcgcatcgtcgcgcgcatg
ccccacgaggacgaccctcgcgtcgagtcctacctcgaaatcctcgaatccgccctcctc
gactgttacctgtcctgccacgaggaggatgcgctggttgagatggccgacagcttgggc
ctctcgcgtcggctgctcgacgagatccaccacgactacctgcggtcgatggcgagggtt
gcggttgccgatggggttgtcaccgacgacgagcgcgctgacctgcttcaggtcgctgaa
ctcctcgggctgtccgccgaccgcgtggatgccgctctggcaatggcttctgcacgttcg
gcctgcgccgagttcgcgttggcggcgggcgacgttctatgcctcacggggtcgatgcgg
cgccgccggtctgagtgggaggcagaactagctcagcgcggcatcgaggtcgggtcgctt
acccgcaggacgcgcctgttggtcgctgccgatcccgactcggccactggaaaggcaagg
aaggcgcgcaagtacggcatccccatcattaacgaggatgcgctcagtcgtctgctagga
gctcgaacctctggcgaatga
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