| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
mpse Mycobacterium pseudoshottsii
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:mpse00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MPSD_11310 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:mpse03021]
MPSD_11310 (rpoC)
03400 DNA repair and recombination proteins [BR:mpse03400]
MPSD_11310 (rpoC)
Enzymes [BR:mpse01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MPSD_11310 (rpoC)
Transcription machinery [BR:mpse03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MPSD_11310 (rpoC)
DNA repair and recombination proteins [BR:mpse03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MPSD_11310 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1239147..1243097
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| AA seq |
1316 aa
MLDVNFFDELRIGLATAEDIRQWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITSVDNEMRHNELSTFEAEMMVERKAVEDQRDADLEARAQKLEAD
LAELEAEGAKADARRKVRDSGEREMRQLRDRAQRELDRLEDIWSTFTKLAPKQLIVDENL
YRELQDRYGEYFTGAMGAESIQKLIETFDIDAEAEILRDVIRNGKGQKKLRALKRLKVVA
AFQQSGNSPMGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPMLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGRPLAMPRLDMVTGLYYLTTEVEGDKGAYQ
PAGQDSPETGVYSSPAEAIMAADRGVLSVRAKIKVRLTQLRPPAEIEDALFGHNGWQPGD
AWTAETTLGRVLFNELLPLGYAFVNKQMHKKVQAAIINDLAERYPMIVVAQTVDKLKDSG
FYWATRSGVTVSMADVLVPPRKKEILDSYEERAEKVEKQFQRGALNYDERNEALVEIWKE
ATDEVGQALREHYPADNPIITIVDSGATGNFTQTRTLAGMKGLVTNPKGEFIPRPIKSSF
REGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREHDCQTERGIMVE
LAERQGDGTLIRDPYIETSAYARTLGADAVDEAGNVVVARGEDLGDPEIEACLAAGITQV
KVRSVLTCTTGTGVCATCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGV
GEDITGGLPRVQELFEARVPRGKAPIADVTGRVRLEDGERFYKITIVPDDGGEEVVYDKL
SKRQRLRVFKHEDGSERVLSDGDHVEVGQQLMEGSADPHEVLRVQGPREVQIHLVREVQE
VYRAQGVSIHDKHIEVIVRQMLRRVTIIDSGATEFLPGSLIDRAEFEAENRRVVAESGEP
AAGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLNGLKENVIIGKLIPA
GTGINRYRNIAVQPTEEARAAAYTIPSYEDQYYSPDFGQATGAAVPLDDYGYSDYR |
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| NT seq |
3951 nt +upstreamnt +downstreamnt
gtgctagacgtcaacttcttcgatgagctccggatcggcctggctaccgcggaggacatc
cgtcagtggtcctacggcgaggtcaagaagccggagaccatcaactaccggaccttgaag
cccgagaaggacggcctgttctgcgagaagatcttcggaccgactcgcgactgggagtgc
tactgcggcaagtacaagcgcgttcgcttcaagggcatcatctgtgagcgctgtggcgtc
gaggtgactcgggccaaggtgcgtcgtgagcggatgggccacatcgagttggccgcgccc
gtcacccacatctggtacttcaagggcgtcccgtcgcggttggggtacctgttggacctg
gcgccgaaggatctcgagaagatcatttacttcgccgcatacgtgatcacctcggtcgac
aacgaaatgcgccacaacgagctgtccacgttcgaggccgaaatgatggtggagcgcaag
gccgtcgaggaccagcgcgatgccgatctggaagcccgtgcccagaagctggaggccgac
ctggccgagctggaggccgagggcgcgaaagccgacgcacggcgcaaggttcgtgacagc
ggtgagcgcgagatgcgtcagctgcgcgaccgggcccagcgtgagctggaccggctcgag
gacatctggagcaccttcaccaagctggcccccaagcagctgatcgtcgacgagaacctc
taccgggaactgcaggaccgctacggcgagtacttcaccggtgccatgggcgcggagtcg
atccagaagctgatcgagaccttcgacatcgacgccgaagccgagatcctgcgggacgtc
attcgcaatggcaaggggcagaagaagcttcgtgccctcaagcgcctgaaggtggtcgcc
gccttccagcagtcgggcaactccccgatgggcatggtgctcgatgcggtgccggtgatt
ccgccggagctgcgcccgatggtgcagctcgacggtggccgcttcgccaccagcgacctc
aacgacctgtaccgccgcgtgatcaaccgcaacaaccgtctcaagaggctgatcgacctc
ggcgcacccgagatcatcgtcaacaacgagaagcggatgctgcaggagtcggtggacgcg
ctgttcgacaacggccgtcgcggccggccggttaccggtccgggtaaccgcccgctcaag
tcgctgtccgatctgctcaagggcaagcagggccggttccgccagaacctgctcggtaag
cgtgttgactactcgggccgttcggtgatcgtggtcggtccgcagctcaagctgcaccag
tgtggtctgcccaagctgatggcgctggaactgttcaagccgttcgtgatgaagcgactg
gtcgacctcaaccacgcgcagaacatcaagagcgccaagcggatggtggagcgccagcgt
ccgcaggtgtgggacgtgctcgaggaagtcattgcagagcacccggtgctgctcaaccgc
gcgcccaccctgcaccgcctcggcatccaggccttcgaaccgatgctggtggaaggcaag
gccattcagctgcacccgttggtgtgtgaggcgttcaacgccgacttcgacggtgaccag
atggccgtgcacctgccgctgagcgccgaggctcaggccgaggcccgcattctgatgctg
tcgagtaacaacatcctgtcgccggcctcgggtcgcccgctggccatgccgcgactggac
atggtgaccgggttgtactacctgaccaccgaggtcgagggtgacaagggtgcctaccag
cccgctgggcaggacagcccggagacgggtgtgtactcgtcaccggcggaagccatcatg
gcggccgaccggggcgtgctctcggtccgcgccaagatcaaggtgcggctgacgcaactg
cgtcccccggccgagatcgaggacgcgctgttcggccacaacggctggcagccgggcgat
gcgtggacggccgagaccaccttgggtcgtgtgttgttcaacgagctgctgccgctgggc
tacgccttcgtgaacaagcagatgcacaagaaggtgcaggccgcgatcatcaacgacctg
gccgagcgctacccgatgatcgtggtcgcgcagaccgtcgacaagctcaaggactccggt
ttctactgggcgacccgcagtggtgtcacggtctcgatggccgacgtgctggtgccgccg
cgcaagaaggagatcctcgactcctacgaggagcgggcggagaaggtcgagaagcagttc
cagcgtggtgctctgaactatgacgagcgcaacgaggcactggtggagatctggaaggaa
gccaccgacgaggtcggccaggcgctgcgcgagcactacccggccgacaacccgatcatc
acgatcgtcgactcgggcgccacgggtaacttcacccagactcgaacgctggccggcatg
aagggtctggtgaccaaccccaagggtgagttcatcccacgcccgatcaagtcctcgttc
cgtgagggcctgaccgtgttggagtacttcatcaacacccacggtgcccgaaagggcttg
gcggacaccgcactgcgtaccgccgactccggctacctgacccgtcgtctggtggacgtc
agccaggacgtgatcgtgcgcgagcacgactgccagaccgagcgcggcatcatggtcgag
ctggccgagcgtcagggcgacggcacgctgatccgcgacccgtacatcgagacctcggcg
tacgcgcggaccctgggcgccgacgcggtcgatgaggccggcaatgtcgttgtggcgcgt
ggtgaggacttgggcgacccggagatcgaggcctgcctggcggcgggtatcacccaggtc
aaggttcgctcggtgttgacctgcaccacgggcaccggtgtgtgcgcgacctgctacgga
cgttcgatggcgaccggcaagctggtcgacatcggtgaggcagtcggcatcgtcgccgcc
caatccatcggtgaacccggcacgcagctgacgatgcgtaccttccaccagggtggtgtg
ggtgaggacatcaccggcggtctgccgcgtgtccaggagctcttcgaggctcgggtgccg
cgtggtaaggcgcctatcgccgatgtcaccggtcgggtccggctcgaggacggtgagcgc
ttctacaagatcaccatcgtccccgacgatggcggcgaggaagtcgtctacgacaagctg
tccaagcggcagcggctgcgggtgttcaagcacgaggacggctcggagcgggtgctttcc
gacggcgaccacgtcgaggtgggccagcagctgatggaaggctctgccgacccgcacgag
gtgctgcgtgtgcagggcccgcgtgaggtgcagatccacttggtccgcgaggtccaggag
gtctaccgggcgcagggtgtgtcgatccacgacaagcacatcgaggtgatcgtgcgccag
atgctgcgccgggtcaccatcatcgactcgggcgcgacggagttcctgcccggctcgctg
atcgaccgtgcggagttcgaggcggagaaccgccgggtggtggccgaaagcggcgagccc
gcggccggtcgtccggtgctgatgggtatcaccaaggcatcgctggccaccgactcgtgg
ctgtcggcggcgtcgttccaggagaccacgcgagtgctgaccgatgcggcgatcaactgc
cgcagcgacaagctcaacggtctgaaggagaacgtgatcatcggaaagctgatcccggct
ggtaccggtatcaaccgctaccgcaacatcgcggtgcagccgaccgaagaggcccgtgcc
gcggcgtacacgatcccgtcctacgaggaccagtactacagcccggacttcggccaggcc
accggtgctgcggttccgttggacgactacggctacagcgactaccggtag |
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