Mycobacterium pseudoshottsii: MPSD_12230
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Entry
MPSD_12230 CDS
T07300
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
mpse
Mycobacterium pseudoshottsii
Pathway
mpse00521
Streptomycin biosynthesis
mpse00523
Polyketide sugar unit biosynthesis
mpse00541
Biosynthesis of various nucleotide sugars
mpse01100
Metabolic pathways
mpse01110
Biosynthesis of secondary metabolites
mpse01250
Biosynthesis of nucleotide sugars
Module
mpse_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
mpse00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
MPSD_12230 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
MPSD_12230 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
MPSD_12230 (rmlC)
Enzymes [BR:
mpse01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
MPSD_12230 (rmlC)
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Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
FdtA
Motif
Other DBs
NCBI-ProteinID:
BBA86877
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Position
complement(1327511..1328116)
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AA seq
201 aa
AA seq
DB search
MQARELKVPGAWEITPTIHGDSRGMFFEWLTDSGFTAFCGHRFDVRQANCSVSSAGVLRG
LHFAELPPSQAKYVTCVSGAVFDVVVDIRLGSPTFGQWDSVLLDDRHRSIYISEGLAHGF
LALQDKSTVMYMCSAEYNPQREHTICATDPELAIDWPLVDGAPPSLSERDAAAGSLDEVR
ASGVLPTWEETQRFIDGLRGT
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcacgcgaactcaaagttccaggcgcgtgggagatcaccccgaccatccacggt
gattcccgcggcatgtttttcgaatggctcaccgacagcgggttcaccgccttctgcggt
catcgcttcgacgtccgccaagccaactgctcggtgtcgtcagccggcgtgctgcggggt
ctgcacttcgccgagctgccccccagccaggccaagtacgtcacctgcgtatcaggcgcg
gtgttcgatgtcgtcgttgacatccgtttgggttcaccgacattcggccagtgggactcg
gtactgctcgacgatcgccaccgatcgatttacatctcggaaggacttgcgcacggtttc
cttgcgctgcaagacaaatcaacggtgatgtacatgtgttcggccgagtacaacccgcag
cgcgagcacacgatctgcgcgaccgaccccgaactggcgatcgactggcccctggtcgac
ggcgcccctcccagcctgtctgaacgcgatgcggcggccggcagcctcgatgaagtgcgc
gcttcgggggtcctgcccacttgggaagagacccagaggttcatcgacggcctgcggggt
acctag
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