Mycobacterium pseudoshottsii: MPSD_12310
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Entry
MPSD_12310 CDS
T07300
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mpse
Mycobacterium pseudoshottsii
Pathway
mpse03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mpse00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MPSD_12310 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpse03021
]
MPSD_12310 (rpoA)
03400 DNA repair and recombination proteins [BR:
mpse03400
]
MPSD_12310 (rpoA)
Enzymes [BR:
mpse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MPSD_12310 (rpoA)
Transcription machinery [BR:
mpse03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MPSD_12310 (rpoA)
DNA repair and recombination proteins [BR:
mpse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MPSD_12310 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
BBA86885
LinkDB
All DBs
Position
1333217..1334260
Genome browser
AA seq
347 aa
AA seq
DB search
MLISQRPTLSEEVLTDSRSQFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKALVVSSEEDEPVTMYLRKQGPGEVTAGDIVPPAGVTVHN
PNMRIATLNDKGKLEVELVVERGRGYVPAVQNRASGAEIGRIPVDSIYSPVLKVTYKVDA
TRVEQRTDFDKLILDVEAKNSITPRDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADHIASFALPIDDLDLTVRSYNCLKREGVHTVGELVSRTESDLLDIRNFGQKSIDEVKVK
LHQLGLPLKDSPPSFDPSEVAGYDVATGTWSTEGAYDDQDYAETEQL
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgctgatctctcagcggccgactctgtccgaggaagtcctcaccgacagccggtcccag
ttcgtcatcgaaccgctggaacccggattcggctacacccttggcaactcgctgcgtcgt
acgctgctgtcctcgattcccggggcagccgtcaccagcatccgcatcgacggcgtgctg
cacgagttcaccacggtgcccggagtcaaggaagatgtcaccgacatcatcctgaacctc
aaggccctggtcgtttcttcggaggaagacgagccggtcaccatgtacctgcgcaagcag
gggcccggtgaggtcaccgcgggcgacatcgtgccgccggccggtgtcacggtgcacaac
cccaacatgcgcatcgccaccctcaacgacaagggcaagctggaggtcgagctcgtcgtc
gagcgcggccgcggttacgtcccggcagtgcagaaccgggcttcgggcgccgaaatcggc
cgcatcccggtcgattccatctactcgccggtgctcaaggtcacctacaaggtggacgcg
actcgtgtcgagcagcgcaccgacttcgacaagctgatcctcgatgtcgaggccaagaat
tcgatcaccccgcgcgacgcgctggcatctgcgggcaagacgctcgtcgaattgttcggt
ctggcacgtgaactcaacgtcgaggccgaaggtatcgagattgggccgtcgccggccgag
gccgaccacatcgcctcgttcgcactgccgatcgacgacctggatctgaccgtgcgctcg
tacaactgcctcaagcgcgagggcgtgcacaccgtcggcgaactggtgtcgcgcaccgag
tcggacttactcgacatccgcaacttcggtcagaagtcgatcgatgaggtcaaggtcaag
ctgcaccagctgggcctgccgctcaaggacagcccgccgagcttcgacccgtctgaggtc
gcaggctacgacgtggccaccggtacctggtcgaccgagggcgcctacgacgaccaggac
tacgccgaaaccgaacagctctaa
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