Mycobacterium pseudoshottsii: MPSD_12670
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Entry
MPSD_12670 CDS
T07300
Symbol
groL1
Name
(GenBank) 60 kDa chaperonin 1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mpse
Mycobacterium pseudoshottsii
Pathway
mpse03018
RNA degradation
mpse05152
Tuberculosis
Brite
KEGG Orthology (KO) [BR:
mpse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MPSD_12670 (groL1)
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
MPSD_12670 (groL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpse03019
]
MPSD_12670 (groL1)
03110 Chaperones and folding catalysts [BR:
mpse03110
]
MPSD_12670 (groL1)
03029 Mitochondrial biogenesis [BR:
mpse03029
]
MPSD_12670 (groL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mpse04147
]
MPSD_12670 (groL1)
Enzymes [BR:
mpse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
MPSD_12670 (groL1)
Messenger RNA biogenesis [BR:
mpse03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
MPSD_12670 (groL1)
Chaperones and folding catalysts [BR:
mpse03110
]
Heat shock proteins
HSP60 / Chaperonin
MPSD_12670 (groL1)
Mitochondrial biogenesis [BR:
mpse03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
MPSD_12670 (groL1)
Exosome [BR:
mpse04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MPSD_12670 (groL1)
Exosomal proteins of other body fluids (saliva and urine)
MPSD_12670 (groL1)
Exosomal proteins of breast cancer cells
MPSD_12670 (groL1)
Exosomal proteins of colorectal cancer cells
MPSD_12670 (groL1)
Exosomal proteins of bladder cancer cells
MPSD_12670 (groL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BBA86919
LinkDB
All DBs
Position
1372567..1374186
Genome browser
AA seq
539 aa
AA seq
DB search
MSKLIEYDETARRAMEAGVDKLADTVRVTLGPRGRHVVLAKSFGGPTVTNDGVTVARDID
LEDPFENLGAQLVKSVATKTNDVAGDGTTTATVLAQALVKTGLRLVAAGINPIALGSGIG
KAADAVSEALLASATPVSGKDAIAQVATVSSRDQLIGDLVGEAMSKVGHDGVVSVEESST
LGTELEFTEGVGFDKGYLSAYFVTDFDAQQAVLEDPLILLHQDKISSLPDLLPLLEKVAE
SGKPLMIIAEDIEGEALATLVVNSIRKTLKAIAVKSPYFGDRRKAFLQDLAAVTGAEVVN
PDAGLVLREVGLEVMGSARRVVVSKDDTIIVDGGGAPEAVEARVNLLRSEIDRSDSEWDR
EKLGERLAKLAGGVAVIKVGAATETELKKRKESVEDAVAAAKAAVEEGIVAGGGSALIQA
RNALKDLRASLSGDEAVGVDVFSEALAAPLYWIATNAGLDGSVVVNKVSELPAGHGLNAA
TLTYGDLAADGIVDPVKVTRSAVLNASSVARMVLTTETAIVDKPAEPEDDGHGHHGHAH
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagctgattgagtacgacgaaactgcgcgccgcgctatggaggcgggcgtggac
aagctcgccgacacggtacgggtgacgctgggcccgcgtggtcggcatgtggtgctggcc
aagtcgttcggtggccccaccgtcaccaacgacggcgtcaccgtggcccgtgacatcgac
ctggaagacccgttcgagaacctgggcgcccagctggtgaagtcggtggccaccaagacc
aacgatgtcgccggcgacggcaccaccaccgcgacggtgctggcccaggcgctggtcaag
accggcctgcggttggtcgccgccggaatcaacccgatcgcgctgggttcgggaatcggc
aaggccgccgacgcggtgtcggaggccctgcttgcctcggccacgccggtgtcgggcaag
gacgccatcgcgcaggtcgccacggtctcctcgcgcgaccagctgatcggtgatctggtc
ggcgaggcgatgagcaaggtcggccacgacggtgtggtcagtgtcgaagaatcctcgacg
ctgggcaccgagctggagttcaccgagggtgtcggtttcgacaagggatacctctcggcc
tacttcgtcaccgacttcgacgctcagcaggctgttctcgaagacccgctgatcctgctg
caccaggacaagatcagctcgctgcccgacctgctgccgttgctggagaaggtcgccgaa
tcgggcaagccgttgatgatcatcgccgaggacatcgagggcgaggcgttggcgaccctg
gtcgtgaactccattcgcaagacgctgaaggcgatcgcggtcaagtcgccctacttcggc
gaccggcgcaaggccttcctgcaagacctggccgcggtgaccggcgccgaggtggtcaac
cccgacgccggcctggtgctgcgggaggtgggcctggaggtgatgggctcggcgcggcgc
gtcgtggtcagcaaggacgacaccatcatcgtcgacggcggcggtgccccggaagcggtc
gaggcgcgggtgaatctgctgcgctccgagatcgacagaagtgactccgagtgggaccgc
gagaagctgggcgagcggctggccaagctggccggcggcgtggccgtcatcaaggttggt
gccgccaccgagaccgagctcaagaagcgcaaggaaagcgtcgaggacgcggtcgcggcg
gccaaggctgccgtcgaggagggcatcgtggccgggggcgggtccgccctgatccaggct
cgcaacgcgctcaaggacttgcgtgcgtcgttgtcgggcgatgaggcggtcggcgtggac
gtgttctccgaggcactggccgcgccgctgtactggattgccaccaacgccggtctggac
ggttcggtcgtggtcaacaaggtcagcgagcttccggccggacacggtctgaacgcggcc
accctgacctacggcgacttggctgccgacggcatcgtcgacccggtcaaggtgacccgc
tcggcagtgctcaacgcgtcatcggtggcacgtatggtgctgaccaccgagacggcgatt
gtcgacaagccggccgagccagaagacgatggccacggccatcacggccacgcgcactag
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