Mycobacterium pseudoshottsii: MPSD_21520
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Entry
MPSD_21520 CDS
T07300
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
mpse
Mycobacterium pseudoshottsii
Pathway
mpse03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MPSD_21520 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpse03400
]
MPSD_21520 (ruvB)
Enzymes [BR:
mpse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MPSD_21520 (ruvB)
DNA repair and recombination proteins [BR:
mpse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MPSD_21520 (ruvB)
RecFOR pathway proteins
MPSD_21520 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_16
RNA_helicase
IstB_IS21
nSTAND3
AAA_14
AAA_3
Zeta_toxin
NTPase_1
AAA_18
Resolvase
HTH_AsnC-type
TsaE
Rad17
DUF815
AAA_25
Motif
Other DBs
NCBI-ProteinID:
BBA87715
LinkDB
All DBs
Position
2309090..2310127
Genome browser
AA seq
345 aa
AA seq
DB search
MSTDPDEREVSPALTVGDGDVDVSLRPRSLREFIGQPRVREQLQLVIQGAKNRGGTPDHI
LLSGPPGLGKTSLAMIIAAELGSSLRMTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRI
ARPAEEMLYLAMEDFRVDVVVGKGPGATSIPLDVAPFTLVGATTRSGALTGPLRDRFGFT
AHMDFYEPAELERVLVRSAGILGIQLGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRA
DGVITRDVAKAALAVYDVDELGLDRLDRAVLSALTRSFSGGPVGVSTLAVAVGEEASTVE
EVCEPFLVRAGMVARTPRGRVATALAWTHLGMTPPAGANQPGLFE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgatcccgatgagcgcgaggtctcaccggcgctgaccgttggcgatggcgat
gtcgacgtcagcctgcggccgcgctcattgcgtgagttcatcggccagccacgggtgcgc
gaacaacttcagctggtgattcagggcgccaagaatcgcggcggcacaccggatcacatt
ctgttgtccggtccgcccgggctcgggaagacctcgctggcgatgatcatcgcggccgag
cttggttcctccctgcggatgacatcgggtcccgcgctcgagcgggccggcgatctggcc
gcgatgttgtccaacctggtcgagcatgacgtgctgttcatcgacgagattcaccgcatc
gcccggcccgccgaggagatgctctatctggccatggaggatttccgggtcgacgtggtg
gtcggcaaagggccgggggcgacatcgattccgctggacgtcgcgccgttcaccctggtc
ggggccaccacccgatccggcgcgttgacggggccgctgcgtgaccggttcggtttcacc
gcacacatggatttttatgagcccgctgagctggagcgagtgctggtccgttccgccgga
attctgggcatccaactcggtgcggacgcgggggccgagatcgcccgccggtcacgcggg
actccgcggatcgccaaccggctgttgcgccgcgtccgtgactttgccgaggttcgtgcc
gacggggtgatcacccgtgatgtcgccaaggcggcgctggcggtttacgacgtcgacgag
ctgggcctggatcggctggaccgtgccgtgctttccgccctgacccgcagtttcagtggg
ggtccggtaggtgtgtcgacgctggcggtggcggtaggggaggaggccagcaccgtggag
gaggtgtgtgagccgttcctggtccgtgccggcatggtcgcgcgcactccacgcggccgg
gtggccaccgcactggcctggactcacctgggcatgacgccaccggcgggagcgaatcag
ccggggctgttcgagtag
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integrated database retrieval system
