Mycobacterium pseudoshottsii: MPSD_24720
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Entry
MPSD_24720 CDS
T07300
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mpse
Mycobacterium pseudoshottsii
Pathway
mpse03030
DNA replication
mpse03410
Base excision repair
mpse03420
Nucleotide excision repair
mpse03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MPSD_24720 (polA)
03410 Base excision repair
MPSD_24720 (polA)
03420 Nucleotide excision repair
MPSD_24720 (polA)
03440 Homologous recombination
MPSD_24720 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpse03032
]
MPSD_24720 (polA)
03400 DNA repair and recombination proteins [BR:
mpse03400
]
MPSD_24720 (polA)
Enzymes [BR:
mpse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MPSD_24720 (polA)
DNA replication proteins [BR:
mpse03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MPSD_24720 (polA)
DNA repair and recombination proteins [BR:
mpse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MPSD_24720 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MPSD_24720 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
DNA_pol_lambd_f
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
BBA88012
LinkDB
All DBs
Position
2667852..2670554
Genome browser
AA seq
900 aa
AA seq
DB search
MSVATEQSTKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEA
PTHIAAAFDVSRQTFRSERYPEYKANRSSTPDEFHGQIDITKEVLNALGITVLAAPGFEA
DDIIATLATQAEGEGYRVLVVTGDRDSLQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYG
LTPVQYPDFAALRGDPSDNLPGIPGVGEKTASKWIVEYGSLQGLVDQVDSVRGKVGDSLR
ANLASVVRNRELTDLVRDVPLAQTPEALRLQPWDRDQIHRLFDDLEFRVLRDRLFDTLAA
VEPEVDQGFDVRGGAVSPGAVAQWLAEHVVDGRRCGLTVVGTHLPHGGDATALAIAAAAD
GEGGYIDTATLTPDDDAALGEWLADPAKPKALHEAKLAIHDLRGRGWTLNGVTSDTALAA
YLVRPGQRSFTLDDLSLRYLRRELRAETPEQQQLSLLDDDDTDVAAAQTAILRARAVIDL
ADALDAELDRIDSTGLLADMELPVQHVLAEMETAGIAVDLTMLGGLQSHFADQIRDAAEA
AYAVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLL
AHRDVTRLKVTVDGLLNSVADDGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRQIR
DAFVVGDGYSELMTADYSQIEMRIMAHLSRDEGLIEAFNTGEDLHSFVASRAFGVPIDEV
TGELRRRVKAMSYGLAYGLSAYGLSSQLKISTEDAKVQMDQYFSRFGGVRDYLMAVVEQA
RKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIEVDKALKE
HPLKSRMLLQVHDELLFEVAAGEREQIEALVRDKMGSAYPLDVPLEVSVGFGRSWDSAAH
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgtcgcgaccgagcaatccacaaagccgacgctgatgttgctagacggcaattcg
ctagcctttcgcgcgttctatgcgctgcccgcggagaacttcaagacccgcggcgggcta
accaccaatgccgtctacggcttcaccgccatgttgatcaatctcctgcgcgacgaagcg
cccacgcatatcgcggcggcatttgacgtgtcacggcagactttccgctccgagcgctat
ccggagtacaaggccaatcgaagctcgacccccgacgagttccacggtcagatcgacatc
accaaggaagttctcaacgcgctggggatcacggtgctggccgcaccgggatttgaggcc
gacgacatcatcgcgacgttggccacccaggctgaaggggaggggtaccgggtgctggtc
gtcaccggcgaccgagactccctgcaactggtcagcgatgacgtgaccgtgctctacccg
cgcaagggcgtcagcgaactcacccgcttcaccccggaggccgtcgtggagaagtacggg
ctcaccccagtgcagtatcccgacttcgccgccttgcgcggtgatcccagcgacaacctg
cccggcattcccggagtgggggagaagaccgcgtccaagtggattgtcgaatacggttcg
ttgcaggggctggtcgaccaggttgactcggtgcgcggcaaggttggcgactcgctgcgg
gcgaatctggccagcgtggtgcgcaaccgggaactcaccgatctggtgcgcgacgtgccg
ttggcgcagaccccagaggccttgcggctgcagccctgggaccgcgaccagattcaccgg
ctgttcgacgacctcgagttccgggtgttgcgcgaccggctcttcgatacgctggccgcc
gtcgaacccgaggtcgaccaggggtttgatgttcgcggaggtgcggtgtcgcccggcgca
gtggcgcagtggctggccgagcatgtcgtggacgggcgtcgctgcggcctgacggtcgtg
ggtacccatctgccccatggtggcgacgccaccgcactggccatcgccgccgccgccgac
ggcgagggcggctacatcgacaccgcgacgctgacccccgatgacgacgcggcgctgggt
gagtggctggccgaccccgccaaacccaaggcactgcatgaggcgaagctggctatccac
gatctgcggggccgaggctggacgctcaacggtgtcacttccgacaccgcgctggccgcc
tatctggttcgtccgggccagcgcagcttcactctcgacgatctctcactgcgctacctg
cgccgcgaattgcgggcagaaacacctgagcagcagcaactttcgctgctcgatgatgac
gacaccgacgtcgcggccgcccagaccgcaatcctgcgggcgcgcgccgtcatagacctc
gccgatgcgctggacgccgagctggacaggatcgactccaccgggttgctggccgacatg
gagttgccggtgcaacacgtgctcgcggaaatggaaacggccggcatcgcggtcgatctg
acgatgctcggcgggctgcaaagccacttcgccgaccagatccgcgatgccgctgaagcc
gcctacgccgtgatcggcaagcagatcaacctgggctcacccaagcaactgcaggttgtg
ctgttcgacgagctgggaatgccgaagaccaagcggaccaagacgggttacaccaccgac
gcggacgcgctgcagtcgttgttcgacaagaccggacatccttttctgcagcatttgttg
gcgcaccgcgatgtcacccgcctgaaggtgaccgtggacgggttgttgaactcggtcgcc
gacgacggccggattcacaccaccttcaatcagaccatcgccgcaacgggccggttgtcg
tcgacggagcccaacctgcagaacatcccgatccgtaccgacgccggccgccagatccgc
gacgctttcgtggtcggcgacggatacagcgagctgatgaccgccgactacagccagatc
gagatgcggatcatggctcacctgtcgcgcgatgagggtcttatcgaagccttcaacacc
ggcgaggatctgcactcgtttgtggcctcgagggccttcggtgtgcccatcgacgaagta
accggtgagttgcgccgccgggtgaaggcgatgtcctacgggttggcatacgggctgagc
gcctacgggctgtccagccagctcaagatctccaccgaggacgccaaggtccagatggat
cagtacttctctcgattcggtggggtgcgtgactacctgatggccgtcgtcgagcaggct
cgcaaagacggctacacctccacggtgttggggcgtcggcgctaccttcccgagctggac
agcagtaatcgacaggtacgggaggcagcggagcgcgccgcgctcaacgcaccgatccag
ggcagcgccgccgacatcatcaaggtggcgatgatcgaggtcgacaaggcgttgaaagaa
caccccctcaagtcgcgcatgttgttgcaggtacacgacgaattgctattcgaagtagcg
gccggtgagcgcgaacagatcgaggcgctggtacgcgacaagatgggcagcgcttatccg
ctcgatgtgcccctggaggtgtcggtcggcttcggccgcagctgggactcggccgcgcac
tga
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