Mycobacterium pseudoshottsii: MPSD_31930
Help
Entry
MPSD_31930 CDS
T07300
Symbol
helY
Name
(GenBank) putative helicase HelY
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
mpse
Mycobacterium pseudoshottsii
Brite
KEGG Orthology (KO) [BR:
mpse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpse03019
]
MPSD_31930 (helY)
Enzymes [BR:
mpse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MPSD_31930 (helY)
Messenger RNA biogenesis [BR:
mpse03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MPSD_31930 (helY)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
HEAT_EF3_GNC1
AAA_30
ANAPC1
Motif
Other DBs
NCBI-ProteinID:
BBA88652
LinkDB
All DBs
Position
complement(3451063..3453855)
Genome browser
AA seq
930 aa
AA seq
DB search
MQLRTLAPSGGRVTELVELAWFTADLPFALDDFQRRACAALEGGHGVLVCAPTGAGKTVV
GEFAVHLALASGGKCFYTTPLKALSNQKHTDLTARYGRDKIGLLTGDLAVNANAPVVVMT
TEVLRNMLYADSPALPGLSYVVMDEVHFLADRMRGPVWEEVILHLPDEVRVVSLSATVSN
AEEFGGWIQTVRGDTAVVVDEHRPVPLWQHVLVGKRLFDLFDYQADKPAGSSRQARVNPD
LLRHIAHRREADRMSDWEPRRSGRGEYGRGGRPRFYRPPPRPDVIATLDSAGLLPAITFV
FSRAGCDAAVQQCLRSPLRLTSEEERAQIAEVIDHRCGDLEDDDLAVLGYYEWREGLLRG
LAAHHAGMLPAFRHTVEELFTAGLVKAVFATETLALGINMPARTVVLERLVKFNGEQHVP
LTPGEYTQLTGRAGRRGIDVEGHAVVLWHPTDENADPSAVAGLASTRTFPLRSSFAPSYN
MTINLVQHMGPEQAHRLLEQSFAQYQADRSVVGLVRGIERGREMLDELAAELGGPDAPIL
DYARMRARVTEMERSQARASRLQRRQEASEALAALRKGDIITITHGRRGGLAVVLESARD
SSDPRPLVLTENRWAGRISSADYTGESPPVGSMTLPKRVEHRQPRVRRDLASALRSAAAG
MTAPAARREKTRAPHDPDLASLREKLRRHPCHNAPGVESRIRQAERYLRIERDNAQLENK
VAAATNSLARTFDRIVGLLTEREYIHGPADDPRVTDDGRLLARIYSESDLLVAECLRTGA
WAGLKPPELAAVVSCVLYETRGSDGGGGRPGVEAPTPRLRQALIQTSRLSVALRADEQAH
RIGQSREPDDGFVNVVYRWARTGDLSAALAAADIEGPGSPLSAGDFVRWCRQVLDLLDQV
RNAAPDPEVRAAAKRAINDIRRGVVAVDAG
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
gtgcaactgcgcaccctcgcgccctcgggcggccgcgtgacagagctggtcgagctagcc
tggttcaccgccgacttacccttcgcgctcgatgacttccaacggcgcgcctgtgctgcc
ctggaaggtgggcacggcgtgctggtgtgtgccccgacgggcgcgggaaagacggtggtc
ggcgaattcgcggtgcacctggcgctggcttcgggaggcaagtgcttttacaccacgccg
ctcaaggcgctgagcaaccagaaacacaccgatctgacggcgcgctacggccgcgacaag
atcgggttgttgaccggtgatctggcggtcaacgcaaacgcgcccgtggtcgtgatgacc
accgaggtgctgcgcaacatgctttacgcggattctcccgcgctaccggggctgtcctat
gtggtgatggacgaggtgcattttctcgccgaccggatgaggggcccggtgtgggaggag
gtgatcctgcatctgcccgacgaggtgcgggtggtcagcctgtccgcgaccgtgagcaac
gccgaggagttcggcggttggatccaaaccgttcggggcgacacggccgtggtggtcgat
gagcatcggccggtaccgctgtggcagcacgttttggtgggcaagcgcctgttcgacctg
ttcgactaccaggctgacaaaccggcgggttcgagccgtcaggcgcgcgtcaacccggac
ctgttgcgtcacatcgcgcatcgccgcgaggcggatcggatgtcggactgggagccgcgt
cggtctggacgcggcgaatacggcagagggggccggccgcggttttaccgcccgccgcca
cgtccggacgtcatcgcgaccctggattcggcgggtttgttgccggcgatcactttcgta
ttctcccgggctggttgtgatgcggcggtccagcagtgcctgcgttcaccgctgcggttg
accagcgaggaggaacgcgcccaaatcgccgaggtgatcgatcaccggtgcggcgatctt
gaggacgacgacctggcggtactgggctactacgagtggcgcgaggggctgctgcgcggc
ctggccgcccaccatgccgggatgctgccggcgtttcggcacaccgttgaggaactgttc
accgccggcttggtcaaagccgttttcgccaccgagaccttggcgctgggcatcaatatg
cccgcgcgcaccgtggtgctggaacggttggtgaagttcaacggtgagcagcacgtcccg
ctgacgccgggggagtacacgcagctgaccgggcgcgccggtcgtcgcggtatcgatgtc
gagggccacgccgtcgtgctctggcatcccaccgacgaaaacgccgatccgtcggcggtg
gccgggctggcctcgacccgcaccttcccgctgcgcagttcgtttgccccgtcgtacaac
atgacgatcaacctggtgcagcacatgggcccggagcaggcgcatcggctgttggaacaa
tcgttcgcgcagtaccaggccgaccgatccgtggtgggcctggtccgcggcattgagcgg
ggcagggagatgctcgacgagctggccgccgagctcggtgggcccgacgcgccgatcctg
gactatgcccggatgcgtgcgcgggtgaccgagatggagcgatcccaggcccgtgcatcc
cggctgcagcgtcggcaggaggccagcgaagcgctggccgcgctgcgcaagggagacatc
atcaccatcacgcacggacgccgtggcgggctggcagtggtgctggaatccgcccgcgac
agctccgacccgaggccgttggtgctgaccgaaaaccggtgggctgggcggatttcgtcg
gccgactacaccggcgagtcgccgccggtcggatcgatgacactgcccaagcgtgtcgaa
catcgccagccgcgggtccgccgcgatctggcctcggcactgcggtcggccgccgcgggt
atgacggcgccagcggcccgccgcgagaagacgcgagcgccgcacgatcccgatctggcg
tcgctccgcgaaaaactgcgccggcatccctgccacaacgcgcccggagtcgaaagccgg
atccgtcaagccgagcgctacctgcgcatcgaacgggacaacgcgcagctggagaacaag
gtcgccgccgccaccaattcgttggctcgcacgttcgaccggatcgtcggcctgctcacc
gagcgtgagtacatccacggcccagccgatgatcctcgggtcaccgatgatggccgcttg
ttggcgcggatctacagcgagagtgatctgttggtggccgagtgcttgcgcaccggcgcg
tgggcggggttgaagccgccggagctggcggcggtggtgtcctgcgtgctctacgaaacg
cgcggcagtgacggtggcggtggccgtcccggggtcgaggcgccgacgccgcggttgcgt
caggcgctcatccagacgtcgcggctgtcggtggcgctgcgtgccgacgaacaagcgcac
cggatcggccaaagccgcgaacccgacgatggttttgttaacgtcgtttatcgctgggcg
cgcaccggggacctgtcggcggcattggccgccgcggacatcgagggccccggttctccc
ttgtcagcgggggatttcgtgcgctggtgccgccaggtgctcgacctgcttgaccaggtg
cgcaacgccgccccggaccccgaagtgcgggccgccgcaaagcgcgcgatcaatgacatc
cggcgcggcgtcgtcgcagttgacgccgggtag
DBGET
integrated database retrieval system
