Mycobacterium pseudoshottsii: MPSD_33160
Help
Entry
MPSD_33160 CDS
T07300
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mpse
Mycobacterium pseudoshottsii
Pathway
mpse03030
DNA replication
mpse03430
Mismatch repair
mpse03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MPSD_33160
03430 Mismatch repair
MPSD_33160
03440 Homologous recombination
MPSD_33160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpse03032
]
MPSD_33160
03400 DNA repair and recombination proteins [BR:
mpse03400
]
MPSD_33160
Enzymes [BR:
mpse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MPSD_33160
DNA replication proteins [BR:
mpse03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MPSD_33160
DNA repair and recombination proteins [BR:
mpse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MPSD_33160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
DEDDh_C
DUF7508
Motif
Other DBs
NCBI-ProteinID:
BBA88757
LinkDB
All DBs
Position
3582594..3584618
Genome browser
AA seq
674 aa
AA seq
DB search
MSVRVPNVTAMGATGGTQLSLTGLDPAAFADIALPGTDLTDPAAAQADDVSLRETTFVVV
DLETTGGRATGTEASPPDAITEIGAVKVRGGVILGEFATLVDPQRSIPPQIVRLTGITTA
MLCDAPTIDPVLPMFFEFVGNSVLVAHNAGFDIGFLRAAAGRCDIARPGSKVVCTVRLAR
RVLSREEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERVGNQGVHSYAELR
AYLPGVTPAQRRKRVLADRLPHRPGIYLFRGPSGEVLYVGTAVDLRRRVSQYFNGADSRG
RMKEMVALAGAVDHVERAHALEAGVRELRMLAAHAPPYNRRSRFPHRWWWVTLTDEAFPR
LSVVRAPRHDRVVGPFRSRTDATETAALLARFTGVRTCTKRLARSALHGPACPELEVSAC
PAARNVTAEGYADAAKRAADLIEGVDNTALTAAVHQVSDLAERHRYESAARLRDHIATAV
EVLWRGQRLRALVALPELVAAAPDGCGGYQFAVIRHGQLAAAGNSRRGTPPMPVVDALHA
GAQTILPAPAPLGGALVEETALIARWLATPGVRIVRVTGAEHTADRAESAGWTSPLRSAG
PWAAWAAAARSARLAAEQVSQGNPRGRPDGGRQSDVLAEPHPSREQLLGRTAVDSHRGAL
QPVLPGGQPFSAAG
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgcgagtgcctaacgtcacggccatgggtgcgacgggtggaactcagctgagt
ctcaccgggctcgatccggccgcctttgcggacatcgccttaccgggcaccgacctcact
gacccggcggccgcccaggcagacgacgtgtcgctgcgcgaaaccaccttcgtggtcgtg
gacctggagaccaccggcggacgagcgacgggcactgaagcatcgccgccggacgccatc
accgagatcggggccgtcaaggtacgtggtggcgtgatcctgggcgaattcgcgaccctg
gtcgacccgcaacgcagcatcccaccccagatcgtgcgattgaccggaatcaccacggcc
atgctgtgtgatgccccgacgatcgaccccgtcttgccgatgttcttcgagttcgtcggc
aactcggtcctggtcgcccacaacgccgggttcgatatcgggttcctgcgggcggccgca
gggcgctgcgacatcgcgcggccgggatcgaaggtggtgtgcacggtccggctggctcgc
cgagtgctcagccgcgaagaagcacccagcgtgcggttggccgctttggcgcgcttgttt
tccgtcgccacccaacccacacaccgcgccctcgacgacgcgcgcgccactgtcgaggtg
ttgcatgccctgattgagcgggtgggcaaccagggcgtgcattcctacgccgagctgcgt
gcatacctaccgggcgtgacgccggcacagcgtcgcaagcgagtgctcgccgaccggctg
ccgcaccgcccggggatctatctgttccgagggccatcgggcgaagtcctctatgtgggc
accgccgtcgacttgcgccgccgggtcagtcagtacttcaacggcgccgattctcggggc
cggatgaaggagatggtcgccctggccggcgccgtcgaccatgtcgagcgcgcacatgcc
ctcgaggccggagtccgtgaactgcggatgcttgccgcgcatgcaccgccgtacaaccgt
cgatcgaggttcccgcaccgttggtggtgggtgacgctcaccgacgaggcgtttccccgc
ctatcggtagttcgtgctccccggcatgaccgcgttgtcggcccgtttcggtcgcgcacc
gacgcgacagaaacggcggccctgctggcgcgcttcaccggtgtcagaacctgcaccaag
cggctggcccgctcggcactgcatggtccggcttgcccagagttggaggtgtcggcctgc
cccgccgcgcgcaacgtcaccgccgaggggtacgccgacgcggccaagcgtgcggccgac
ttgatcgagggagtggataacaccgcactgaccgcggccgtgcaccaagtcagcgacctg
gccgagcggcaccgctatgagagcgcggcacggctgcgcgaccacatcgccacagctgtc
gaagtgctctggcgtggccaacgactgcgcgcgctggtagccctgcccgagctggtcgcg
gccgctcccgatggctgcggcggctaccagttcgcggtgatccgccacggccagctcgcc
gccgccggtaattcccgacgtgggacaccgccgatgccggtggtcgacgccctccacgcc
ggagcgcaaacgatcttgccggcaccggcgccactcggcggcgcgctggtagaagagacc
gcgctgattgcccgctggctggcgaccccgggagtgcggatcgtgcgagtcaccggcgct
gagcacaccgccgaccgtgcggagtccgccggctggacttcgccgctgagatcagccgga
ccgtgggcggcatgggcggctgcggcgcgttcggcgcggctggccgcagagcaggttagc
caaggaaatccgcgtggtcgcccggatggcggccggcaatcagacgtgctggctgaaccg
cacccatcgcgcgagcaattgctcggccgcaccgctgtcgatagccaccgcggcgcgttg
cagcccgtcctgccaggcgggcagccattcagcgcggctggatag
DBGET
integrated database retrieval system
