Mycobacterium pseudoshottsii: MPSD_40470
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Entry
MPSD_40470 CDS
T07300
Symbol
smc
Name
(GenBank) chromosome partition protein Smc
KO
K03529
chromosome segregation protein
Organism
mpse
Mycobacterium pseudoshottsii
Brite
KEGG Orthology (KO) [BR:
mpse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mpse03036
]
MPSD_40470 (smc)
Chromosome and associated proteins [BR:
mpse03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
MPSD_40470 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
BBA89423
LinkDB
All DBs
Position
complement(4404219..4407821)
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AA seq
1200 aa
AA seq
DB search
MYLKSLTLKGFKSFAAPTTLRFEPGITAVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK
MEDVIFAGTSSRAPLGRAEVTVTIDNSDNALPIEYTEVSITRRMFRDGASEYEINGSSCR
LMDVQELLSDSGIGREMHVIVGQGKLDEILQSRPEDRRAFIEEAAGVLKHRKRKEKALRK
LDAMSANLARLTDLTTELRRQLKPLGRQAEVARRAQTIQADLRDARLRLAADDVVSRRAE
REAIFEAEATMRREHDEAAARLTVAAEELAAHEAALAELTSRAESVQHTWFGLSALAERV
GTTVRIANERAQHLDVEPVTNSDTDPDALDAEAEQVAIAEQQLLVELAEARDRLDAARAE
LADREHRAAESDRAHLAAVRAEADRREGLARLAGQVETMRARVESIDDSVARLSERIEHA
AARAQQTRAEFETVQARVGELDQGEVGLDEQHERTVAALRLAEQRLAELQVAERDAERQV
ASLRARIEALSVGLDRKDGAAWLARNHSDAGLFGSVAQLVKVRSGYEAAVAAVLGSAAEA
LAADSFGAARSAVTALKQADGGRAALVLGDWPDAHDHRAAGGLPSGTLWALDLIEVPSRL
RPAMTAMLSGVVVVNDLSEALDLVQAQPQLRAVTLDGDLVGAGWVSGGSDRKPSTLEITS
EIDKARSELAAAEVRVAELGAALSGALTDQTARQDAAEQALAALNESDTAISAMYEQLGR
IGQDARGAEEEWTRLLRQREELEVGRTQTLEEVLELESRLRNAQESQHVQAAEPVDRQEI
AAAAESARAIEVEARLTVRTAEERANALRGRADSLRRAAAAEREARVRAELARAVRLRSA
AVAAAVAESGRLLAWRLNRVVDAASQLRDELAAERQQRSAAMSAVREETSSLSARVATLT
DSLHRDEVANAQAALRIEQVEQMVLEQFGMAPSDLVAEYGPDVALPPTELEMAEFEQARE
RGEQVVAPAPMPFDRATQQRRAKRAERELTELGRVNPLALEEFAALEERYNFLSTQLEDV
KAARKDLLDVVADVDARILQVFSDAFVDVEREFQIVFSSLFPGGEGRLRLTAPEDMLTTG
IEVEARPPGKKVSRLSLLSGGEKALTAVAMLVAIFRARPSPFYIMDEVEAALDDTNLRRL
IGLFEMLRDRSQLIIITHQKPTMEVADALYGVTMQGDGITAVISQRIRGQQVDRLVANSS
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
gtgtacctcaagagtctgacgctgaagggcttcaaatccttcgctgcgccgacgactctg
cgcttcgagccgggcatcacggccgtggtcgggcccaacggatccggcaagtccaatgtg
gtggatgccctggcctgggtgatgggggagcagggcgccaagaccctgcgtggcgggaag
atggaagacgtcattttcgccggtacgtcgtcgcgggcaccgctggggcgcgccgaagtc
acggtcacgatcgacaattccgacaacgccctgccgatcgagtacaccgaggtgtcgatc
accaggcgcatgttccgcgatggcgccagtgagtacgaaatcaacggcagcagttgccgg
ttgatggatgtccaggaactgctgagcgactcgggcatcggccgtgagatgcatgtgatc
gtcggtcagggcaagctggacgagatcctgcagtcgcgaccggaggaccgccgcgcattc
atcgaagaagccgcgggtgtgctcaaacatcgcaagcgcaaggaaaaggccttgcgcaaa
ctcgacgcgatgtcggccaacctggcccggctcaccgacctgaccaccgaactgcgtcgc
cagctcaagccgttgggccgacaggccgaggtggcccgccgtgcccagaccattcaggcc
gatctgcgcgatgcgaggctgcggctggccgccgacgatgtggtgagcaggcgcgccgag
cgcgaagccattttcgaagccgaggcgacgatgcgtcgcgagcacgacgaggccgctgcc
cgcctgaccgtcgcggccgaagagttggccgctcacgaggcggcgctggccgagctcacg
tccagggcggagtcggttcagcacacctggttcgggttgtcggcattggccgaacgagtg
ggcaccacggtgcgcatcgccaacgagcgtgctcagcatctcgacgtcgagccggtgacc
aacagcgacaccgacccggacgcgttggacgcagaggccgagcaggtcgcgatcgccgaa
caacagctgctggtcgagctggccgaagcccgcgaccggctggatgccgcgcgcgcggag
ttggccgaccgtgagcatcgtgccgccgagtccgaccgcgcgcacctggcagcggtccgc
gccgaggccgaccgccgtgaggggctggcgcgcctggccggacaggtggaaaccatgcgg
gcgcgcgtcgaatcgatcgacgacagcgttgcgcggctctccgagcgcatcgaacatgcc
gccgcccgggcccagcagacccgcgcggagttcgagaccgtgcaggcccgcgtcggcgaa
ttggatcagggcgaggtcggtctggacgagcagcacgaacgcacggtggcggcactgcgg
ctggctgagcagcggctcgccgaactgcaggtcgccgaacgtgacgccgagcggcaggtg
gcgtcgctgcgggcccgcatcgaggcgctgtcggtgggtctggaccgcaaagacggcgcg
gcgtggctggcccgcaatcacagcgacgcggggcttttcggatcggttgcccagctggtc
aaggtgcgttcgggttacgaggcggcagttgccgcagtgctcgggtctgcggccgaggcg
ctggccgccgacagtttcggggcagcccgcagcgcggtcaccgcgctcaagcaggccgac
ggcggccgcgccgcgctggtgctgggtgactggccggatgcccacgaccaccgggcggcc
ggtggcctgccgtccgggacgctgtgggcgctggatttgatcgaggtgccgtcgcggtta
cggccagcgatgacggcgatgctctcgggcgttgtcgtggtcaacgacttgtccgaagcg
ctggatctggtgcaggcccaacctcaactgcgtgcggtcaccctcgacggtgatctggtg
ggtgccggctgggtgagcggcggttcggaccgcaaacccagcacgctggagatcacatcg
gagatcgacaaggcccgtagcgagctggccgccgcggaggtgcgggtggcggaactcggt
gcggcgctctcgggcgcgttgaccgatcagaccgcccgccaggatgcggccgaacaggct
ttggcggcgctcaacgaatccgacaccgccatttcggcgatgtatgagcaactgggccgc
atcggacaggatgcgcgtggggccgaggaagagtggaccaggctgctgcgacagcgtgag
gaattagaggttgggcgaacgcagaccctcgaagaggtcctcgagctggagagccggctg
cgcaacgctcaagagtcccagcacgtccaggctgccgaaccggtcgaccgccaggagata
gcggcggctgccgagagcgcgcgcgccattgaagtggaggccaggctcaccgtgcggacc
gccgaggagcgtgccaacgcgttgcgcgggcgggctgactcgctgcgccgggccgccgcg
gcggaacgcgaagcccgggtgcgcgccgagcttgcgcgggcggttcgattgcgctcggcg
gcggtggccgcggccgtcgcagaatccgggcggctgttggcgtggcggttgaaccgggtg
gtcgacgcggcatcgcagcttcgtgacgagttggcggccgagcggcagcagcgttcagcg
gcgatgtcggcggttcgcgaagaaaccagctcgctgagcgcccgagtggccacactgact
gattcgctgcaccgtgacgaggtggcaaatgcccaggcggcgttgcgaattgagcaagtc
gaacagatggtgctcgagcagttcgggatggcgccctcagatctggtcgccgagtacggc
ccagatgttgcgctgccgcccaccgagctggagatggccgaattcgaacaggcccgcgaa
cgtggcgagcaggtcgtcgcgccggccccgatgccttttgatcgcgccacccagcagcgc
cgcgccaaacgcgccgagcgtgaactgacggagctgggcagggtcaacccgctggccctg
gaagaatttgctgcgctagaggagcgctacaacttcctgtccacccagctcgaggacgtc
aaagcggcccgcaaggatttgctggatgtggttgccgacgtcgatgcccgcatcctgcag
gtgttcagcgacgccttcgtcgacgtggaacgtgagttccagatcgtcttcagttcgttg
ttcccggggggtgagggccggttgcggctcaccgcgcccgaggacatgctcaccaccggc
atcgaggtggaggcccgcccgcccggcaagaaggtctcccggctgtcgttgctctccggt
ggtgagaaggcgctgaccgcggtggcgatgctggtggcgatcttccgggcccgtccgtcg
ccgttctacatcatggacgaggtggaggcggccctcgatgacacgaacctgcgccggttg
atcggcctgttcgagatgctgcgggaccgatcgcagctcatcatcatcacgcaccagaag
ccgacgatggaagtcgccgatgcgctctatggggtcaccatgcagggcgatggcatcacc
gcggtgatctcgcagcggatccgcggtcagcaggtcgatcggctggttgccaactcgtcg
tag
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