Mycobacterium pseudoshottsii: MPSD_41120
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Entry
MPSD_41120 CDS
T07300
Name
(GenBank) hypothetical protein
KO
K03530
DNA-binding protein HU-beta
Organism
mpse
Mycobacterium pseudoshottsii
Brite
KEGG Orthology (KO) [BR:
mpse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpse03032
]
MPSD_41120
03036 Chromosome and associated proteins [BR:
mpse03036
]
MPSD_41120
03400 DNA repair and recombination proteins [BR:
mpse03400
]
MPSD_41120
DNA replication proteins [BR:
mpse03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
MPSD_41120
Chromosome and associated proteins [BR:
mpse03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
MPSD_41120
DNA repair and recombination proteins [BR:
mpse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
MPSD_41120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
BBA89482
LinkDB
All DBs
Position
complement(4503579..4504241)
Genome browser
AA seq
220 aa
AA seq
DB search
MNKAELIDVLTQKLGSDRRQATVAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA
RNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMASAAAKKAAKKAP
AKKAATKTAAKKAATKAPAKKAATKAPAKKAATKAPAKKAVTKATKAPTKKVTKATVKKA
AAKAPVRKAATKAPAKKAAAKRPATKAPAKKATSTRRGRK
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagcagagctcattgacgtgctcacacagaaattgggctcggaccgtaggcag
gcaaccgtggccgtcgagaatgttgtcgacaccattgtgcgcgccgtgcacaagggcgac
agcgtcacgattaccggatttggggtgtttgaacagcgtcgccgtgcggcccgggtggcc
cgcaatccgcgtaccggtgagacggtgaaggtcaagccgacgtccgtcccggcatttcgc
ccaggcgcgcaattcaaagcggttgtctctggcgcgcagcgtctcccggcggagggcccg
gcggtcaagcgtggcgtgatggcgagcgccgctgccaagaaggcagcaaagaaggctccc
gccaagaaggccgcgaccaagaccgctgccaagaaggctgcgaccaaggctcccgccaag
aaggccgcgaccaaggctcccgccaagaaggccgcgaccaaggctcccgccaagaaggcc
gtgaccaaggccaccaaggctccgaccaagaaggtgaccaaggcaacagtgaagaaggcc
gccgccaaggcgccagtccgcaaggctgcgaccaaggcacccgccaagaaggctgcggca
aagaggccggccaccaaggctcccgccaagaaggcgacgagcacccggcgcggtcgcaag
taa
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integrated database retrieval system
