Mycobacterium pseudoshottsii: MPSD_41700
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Entry
MPSD_41700 CDS
T07300
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mpse
Mycobacterium pseudoshottsii
Brite
KEGG Orthology (KO) [BR:
mpse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpse03400
]
MPSD_41700
Enzymes [BR:
mpse01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
MPSD_41700
DNA repair and recombination proteins [BR:
mpse03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
MPSD_41700
Prokaryotic type
MPSD_41700
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BBA89538
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All DBs
Position
4568137..4569465
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AA seq
442 aa
AA seq
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MWFRRDLRLGDHPALAAAADSEEVLACFVVDPRLEASSGLRRLQFLGDSLRQLNDALQGR
LLVTRGRPEQRIPLIAKAIEASSVHVTGDFAPFGRRRDERVAAGLGRVPLVATGSPYLVS
PGRVVKNDGSPYQVFTPFFRKWQDARWRAPADTGPGSACWLDPAQTDIEQCEIPDPGTEL
DLAAGEAAAIREWTAFRTAKLDRYEHDRDRPDFEGTSRMSAHLKFGTIHPRTMVAGMDLT
GTGARSYLRELAFRDFYGAVLHHWPASAWHNWNSNFDGIVTDTDANARRLFECWKAGETG
YPLVDAGMRQLRETGFMHNRVRMIAASFLVKDLHLPWQWGAAWFLDQLTDGDLASNQHGW
QWSAGCGTDAAPYFRIFNPSAQAEKFDPAGDYIRRWVPELRDVDNVHRIQRRGGPCPSTY
PAPIVDHGTERAEALRRYHDIG
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
ttgtggtttcgccgcgatctgcggcttggcgatcatccggcactggccgctgccgccgat
agcgaggaagtgctcgcctgcttcgtggtcgacccgcgcctggaagcttcctcaggcctg
cgccgcctgcagttcctcggcgactcacttcgccaactcaacgatgcactgcagggccgc
ctactggtgacacgcggtcggcccgagcagcggattccgctgatagccaaagcaatcgag
gcatcatcggtgcacgttaccggcgatttcgcgccgtttgggcggcgtcgcgacgaacgg
gttgcagcggggctgggccgcgtgccactggtagcgacgggctcgccgtatctggtttca
ccgggtcgagtcgtcaaaaacgatggcagcccctaccaggtgttcaccccgttcttccgc
aaatggcaggacgcgcgatggcgagcaccggctgacacggggcccggatcggcgtgttgg
ctggatccggcgcagaccgacatcgagcagtgcgagatccccgatccgggcactgagctt
gacctggccgccggtgaggccgcggccatccgggaatggacagcattccgcaccgccaag
ctggaccgctatgagcatgaccgcgacaggccggacttcgagggcaccagccggatgtcg
gcgcacctgaagttcggcaccatccatccccggaccatggtcgcgggcatggacctgacc
ggcaccggagcgcgtagttacctacgtgagttggcgttccgggatttttatggcgccgtc
ctgcaccactggccggccagcgcctggcacaactggaacagcaacttcgacggcatcgtg
accgacaccgacgccaacgccagacgccttttcgagtgctggaaggccggagaaaccgga
tatccattggtcgatgccgggatgcgtcagttgcgcgaaaccgggttcatgcacaaccgg
gtccggatgatcgccgcatccttcctggtcaaagacctgcacctgccctggcaatggggg
gccgcctggttccttgaccaactcaccgacggtgacctggccagcaatcagcacggctgg
cagtggtcggcgggatgcggcaccgacgccgcgccgtactttcggatcttcaatccgagc
gcacaagccgaaaagttcgatcccgcgggcgattacattcgacgttgggtccccgaactg
cgcgatgtcgacaacgtgcatcggattcagcggcgcggcggcccatgcccgtcaacatat
ccggcgccgatcgtggatcacggcaccgaacgcgccgaggcgttgcgccgctatcacgac
atcggctga
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