Mycobacterium pseudoshottsii: MPSD_42400
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Entry
MPSD_42400 CDS
T07300
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mpse
Mycobacterium pseudoshottsii
Pathway
mpse00061
Fatty acid biosynthesis
mpse00071
Fatty acid degradation
mpse01100
Metabolic pathways
mpse01212
Fatty acid metabolism
mpse02024
Quorum sensing
mpse04146
Peroxisome
Module
mpse_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mpse00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
MPSD_42400 (fadD)
00071 Fatty acid degradation
MPSD_42400 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
MPSD_42400 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
MPSD_42400 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mpse01004
]
MPSD_42400 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mpse04147
]
MPSD_42400 (fadD)
Enzymes [BR:
mpse01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
MPSD_42400 (fadD)
Lipid biosynthesis proteins [BR:
mpse01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
MPSD_42400 (fadD)
Exosome [BR:
mpse04147
]
Exosomal proteins
Exosomal proteins of breast milk
MPSD_42400 (fadD)
Exosomal proteins of breast cancer cells
MPSD_42400 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
BBA89604
LinkDB
All DBs
Position
complement(4640040..4641527)
Genome browser
AA seq
495 aa
AA seq
DB search
MTSLAGNLIEGARRHPNRIALRLDEIEIPYGALDTASARLAGLLIQRGLGPGDRVGVMLP
NVPYFAVAYYGVLRAGGVVVPMNVLLKERETSFYLTDSEAKAIIAWHEFAPAAQAGADEA
GAECILVKPGEFEELIQAAEPLEEAAVREDDDTAVILYTSGTTGKPKGAELTHANLRRNV
EVIVQMLQVGPDDVILGALPQFHAFGQTAGLNAAVAAGACLTLIPRFSPEKALQIIERDR
VTVFEGVPTMFAAMLHSTERPDTGSLRLCVSGGAAMPVEVMRGFEQAFGTMVLEGYGLSE
TSPTASFNHPDRERKPGSIGTPIAGVQMKLLEVDTHGIGEIAIRGHNVMKGYWNRPDATA
AAIDAEGWFRTGDLARIDEDGYYFIVDRSKDMIIRGGYNVYPREIEEVLYEHPEVREAAV
VAVPDDMLGEEVGAATALIPGATSDAAALSDFVNERVAAYKYPRRIWFVDELPKGPTGKI
LKRDITVPQASPAQQ
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
gtgaccagtctggccggcaacctgatcgagggcgctcgccgccacccgaaccgaatcgcg
ttgcgtctcgacgaaatcgaaataccttacggcgcacttgataccgccagtgcgcggctc
gccggcctgctgatccagcgcggattaggacccggcgaccgggtgggtgtcatgctgccc
aacgtcccctacttcgcggttgcctactatggcgtgctgcgtgcgggcggggtggtggtg
ccgatgaacgtgttgctcaaggagcgggaaaccagcttttatctcaccgactccgaagcc
aaggcgatcatcgcctggcacgagtttgctcccgcagctcaagcgggtgccgatgaggct
ggcgccgagtgcatcttggtcaagccgggcgaattcgaggaactcatccaagcggccgag
ccgctcgaagaggcggccgtgcgcgaggacgacgacaccgcggtgatcctctacacctcg
ggcaccaccggaaagcccaagggcgccgagctcacccacgccaacctgcgccgcaacgtc
gaggtgatcgtgcagatgctgcaggtggggcccgatgatgtgatcctgggcgccctgccc
cagttccacgcgttcgggcagaccgccgggctcaacgccgcagtcgccgccggcgcatgc
ctgaccctgatcccgcgcttctcgccggagaaggctttgcagattatcgagcgagaccgg
gtcactgtttttgagggcgtgcccaccatgttcgccgcgatgctgcacagcaccgagcgc
ccggacaccggatcgttgcggctgtgcgtgtccggtggggccgcgatgccggtcgaagtg
atgcgcggcttcgagcaggccttcggcaccatggtgctcgaggggtacggcctgagcgaa
acctcgccgacggcgtcgttcaaccatcccgatcgggagcgcaagccggggtcgatcggc
acgccgatcgctggggtccagatgaaacttctcgaagtcgacacgcacggcatcggcgag
atcgccatccgcgggcacaacgtgatgaagggctactggaaccggcccgatgccaccgcg
gccgcgatcgacgccgagggctggtttcgcaccggggatctggcgcgcatcgatgaggac
ggctactacttcatcgtggaccggtccaaggacatgatcatccggggcggctacaacgtc
tacccgcgcgagatcgaggaggtgctctacgagcatcccgaggtccgcgaagcggcggtg
gtcgccgttcccgacgacatgctcggggaggaggtgggcgccgcgactgcgctgataccg
ggcgccacgtcagacgccgcagcgctttcggacttcgtcaacgaacgcgtcgccgcttac
aagtatccccgtcggatctggttcgtcgatgaactgcccaaggggcctaccggcaagatc
ctcaaacgcgacatcaccgttccccaggctagcccggcgcagcagtga
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