Mycobacterium pseudoshottsii: MPSD_47050
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Entry
MPSD_47050 CDS
T07300
Symbol
uvrD1
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mpse
Mycobacterium pseudoshottsii
Pathway
mpse03420
Nucleotide excision repair
mpse03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mpse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MPSD_47050 (uvrD1)
03430 Mismatch repair
MPSD_47050 (uvrD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpse03400
]
MPSD_47050 (uvrD1)
Enzymes [BR:
mpse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MPSD_47050 (uvrD1)
DNA repair and recombination proteins [BR:
mpse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MPSD_47050 (uvrD1)
MMR (mismatch excision repair)
Other MMR factors
MPSD_47050 (uvrD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
CarD_TRCF_RID
DUF3013
DEAD
Motif
Other DBs
NCBI-ProteinID:
BBA90024
LinkDB
All DBs
Position
complement(5128752..5131061)
Genome browser
AA seq
769 aa
AA seq
DB search
MTVQATDADQLLEGLNAQQRQAVVHEGSPLLIVAGAGSGKTAVLTRRIAYLIAARGVGAG
QILAITFTNKAAAEMRERVVSLVGGRAKYMWVSTFHSTCVRILRNQAALIKGLNSNFSIY
DADDSRRLLQMIGRDMGLDIKRYSPRLLANAISNLKNELIDPDRAVSDLSEDSDDLARTV
ASVYAEYQRRLRAANALDFDDLIGETVGILQAFPDIAGHYRRRFRHVLVDEYQDTNHAQY
VLVRELVGRGSEDEPGDVPPAQLCVVGDADQSIYAFRGATIRNIEDFERDYPDATTMLLE
QNYRSTQNILSAANSVISRNSGRREKRLWTDAGAGELIVGYVADNEHDEARFVAEEIDAL
AERDEITYNDVAVFYRTNNSSRSLEEVFIRAGIPYKVVGGVRFYERKEIRDIVAYLRVLD
NPGDAVSMRRILNTPRRGIGDRAEACVAVYAENTGAGFSDALVAAAEGKVPMLNSRAEKA
IAGFVELLDELRGRLDSSEGDLGELVEAVLERTGYRRELESSTDPQELARLDNLNELVSV
AHEFSTDLANAAEPEPDAEDVPDTGMLAAFLERVSLVADTDDIPEHGAGVVTLMTLHTAK
GLEFPVVFVTGWEDGMFPHMRALDDPTELSEERRLAYVGITRARQRLYLSRAIVRSSWGQ
PMLNPESRFLREIPQELLNWRRLAPKPSFSAPVSGAGRFGTARSAPVRTSTSKRPLLVLQ
PGDRVTHDKYGLGRVEEVSGVGESAMSLIDFGSSGRVKLMHNHAPVAKL
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgactgttcaagcgaccgatgccgaccaactgctggaaggtctcaacgcacaacagcgc
caggccgtggtgcacgaaggctcgccgctgctgattgtcgcgggcgcgggctcgggcaag
acggcggtgctgaccaggcggatcgcctacctgatcgcggcccgcggtgttggggccggt
cagatcctggccatcaccttcaccaacaaggccgccgccgagatgcgggagcgggtggtg
agcctggtcggcggccgggccaagtacatgtgggtgtccaccttccactcgacctgcgtg
cgcatcctgcgcaaccaggcggcgctgatcaagggcctcaactcgaacttctcgatctat
gacgcagacgattcacggcggctgctgcagatgatcgggcgcgatatgggcttggacatc
aagcgatactcgccgcgcttgctggccaatgccatctccaatctgaaaaacgaattgatc
gacccggatcgggcggtgtcggatctgtcggaggattccgatgacttggcgcgcaccgtc
gcatcggtctacgcggaatatcagcgccgcctgcgggccgccaatgcgctggactttgac
gatctcatcggcgagacggtgggcattctgcaagcttttcccgacatcgccgggcactat
cggcgccggtttcggcacgttctggtcgacgaataccaagacaccaaccacgcgcaatac
gtcctggtgcgggaactggttggtcgcggcagcgaagacgagcccggggacgtgcccccg
gcgcagttgtgcgtagtcggcgacgccgatcagtcgatctatgcgtttcgcggcgccacc
attcgcaacatcgaagacttcgaacgcgactatcccgatgccacaacgatgctgctggaa
cagaattaccgctcgacacagaacatcctgtcggcggccaactcggtgatctcgcgcaac
tccggacgtcgcgagaagcggctgtggaccgatgctggcgcgggggagttgatcgtcggc
tacgtcgccgacaacgaacacgacgaggcgaggttcgtcgccgaagagatcgacgcactg
gccgagcgggacgagatcacctacaacgacgtcgcggtcttctatcgcaccaacaattcg
tcgcggtcgctggaagaggtgttcatccgcgccggcattccctacaaggtcgtcggcggc
gtgcgcttctacgagcgcaaggagattcgtgacatcgtcgcctacctgcgggtgctggac
aaccccggcgatgcggtcagcatgcggcgcatcctcaacacgccgcgccgcggcatcggc
gatcgtgccgaggcctgtgtggcggtgtacgcggagaacaccggcgccggcttctccgac
gctctggtggccgccgccgagggcaaggtgccgatgctcaatagccgtgcggagaaggcg
atcgcgggctttgtcgagttgctcgacgagttgcgaggacgcctcgactcatccgagggg
gatctcggtgagttggtggaggcggtgctggaacgcaccggataccgccgcgaactggag
tcctccaccgatccgcaggagctggcccggctggacaacctcaacgaactcgtcagcgtt
gcccacgaattcagcaccgacctggcaaatgccgccgagcccgaaccggatgccgaggat
gtgccggacaccggcatgctggcggcctttctggaacgggtgtcgctggtcgccgacacc
gacgatattcccgagcatggcgcgggcgtggtcaccctgatgaccctgcacaccgccaaa
ggtctggagttcccggtggtgttcgtgaccgggtgggaggacgggatgttcccgcacatg
cgggcactggatgatccgaccgaactctccgaagaacggcgactggcctacgtcggcatc
acccgggcccggcaacggctctacctgagtagggccatcgtccggtcttcctgggggcag
ccgatgctcaaccccgaatcccggttcctgcgggagatacctcaggaactcctcaactgg
cgccgccttgcgcccaagccgtcgttcagcgcgcctgtgagtggagccggccggtttggc
actgcgcggtcagcacccgtccgcacgagcacgagcaagcggccgctgttggtgctgcag
cccggcgatcgcgtcacacacgacaagtacggtctgggccgcgtcgaggaagtatccggt
gtcggcgaatcggcgatgtcgctgatcgacttcggtagctcgggacgggtgaagctgatg
cataaccacgccccggtcgccaagctttag
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