Mycobacterium pseudoshottsii: MPSD_47380
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Entry
MPSD_47380 CDS
T07300
Symbol
mku
Name
(GenBank) non-homologous end joining protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
mpse
Mycobacterium pseudoshottsii
Pathway
mpse03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mpse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
MPSD_47380 (mku)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpse03400
]
MPSD_47380 (mku)
DNA repair and recombination proteins [BR:
mpse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
MPSD_47380 (mku)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Zn_Ribbon_TF
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-ProteinID:
BBA90053
LinkDB
All DBs
Position
complement(5166197..5167072)
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AA seq
291 aa
AA seq
DB search
MRSIWKGSIAFGLVNVPVKVYSATQDHDIKFHQVHAKDNGRIRYKRVCEVCGEVVEYSDL
ARAFESDDGQMVIINDDDLATLPEDRSREIEVLEFVPAEEVDPMMIDRSYFLEPDSKSSK
SYVLLAKTLAETERMAIVHFTLRSKTRLAALRVKDFGKREVMVVHTLLWPDEIRDPDFPV
LDKEVEIKPAELKMAGQVVESMADDFNPDRYRDTYQEQLQELIDAKLEGGEAFTAEEQPA
ELDETEDVSDLLAKLEASVKARSGDGKSAAKKSTAEKAPAKKARAKQAAKS
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgcgctccatctggaagggttcaatcgctttcgggctggtgaatgtgccggtcaaggtg
tacagcgccactcaggaccacgacatcaagttccatcaggtgcacgccaaggacaacgga
cgcatccggtacaagcgggtatgcgaggtctgtggcgaggtggtcgaatactccgacctg
gcccgcgccttcgaatccgacgatggccagatggtgatcatcaacgacgacgacctcgcc
acgttgcccgaagatcgcagccgcgaaatcgaggtgctggaattcgtcccagccgaagaa
gtcgatccgatgatgattgaccgcagctacttcctggagcccgactcgaagtcctctaaa
tcgtatgtgctgctggccaagacgctcgccgagacggagcggatggcgatcgtgcatttc
acgctgcgcagcaagacgcggctggcggcgttgcgggtcaaggacttcggcaagcgcgag
gtcatggtggtgcataccctgttgtggccagacgagatccgcgacccggatttcccggtg
ctggacaaggaggtggagatcaaacccgcggagctcaagatggccggccaagtggtggag
tcgatggcagacgacttcaacccggaccgctaccgcgacacctatcaggagcaactgcag
gagctgatcgacgccaaactcgaaggcggggaagcatttaccgccgaagaacaacccgca
gagctggacgagaccgaagatgtctccgacctgctggccaagctggaggcgagcgtgaaa
gcgcgttcgggtgacgggaagtcagcggcgaagaagagcaccgccgaaaaggcgccggcc
aagaaggcccgggccaaacaagctgccaagtcctga
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