Macrococcus psychrotolerans: QA539_04780
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Entry
QA539_04780 CDS
T10921
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mpsh Macrococcus psychrotolerans
Pathway
mpsh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpsh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QA539_04780 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpsh03019
]
QA539_04780 (pnp)
03016 Transfer RNA biogenesis [BR:
mpsh03016
]
QA539_04780 (pnp)
Enzymes [BR:
mpsh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
QA539_04780 (pnp)
Messenger RNA biogenesis [BR:
mpsh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QA539_04780 (pnp)
Transfer RNA biogenesis [BR:
mpsh03016
]
Prokaryotic type
tRNA degradation factors
QA539_04780 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
S1_2
OB_RRP5_4th
SPATA25
Motif
Other DBs
NCBI-ProteinID:
WZE71817
UniProt:
A0AAU6RQC8
LinkDB
All DBs
Position
953194..955305
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AA seq
703 aa
AA seq
DB search
MSQEKKVFKTEWAGRPLIIETGQLAKQANGAVLVRYGDTVVLSTATASKEPRDVDFFPLM
VNYEEKLYAAGKIPGGFNKREGRPGEDATLTSRLIDRPIRPLFPKGYRHDIQVISMVMSV
DPDNSPEMAAMIGSSMALSVSDIPFEGPIAGVNVGLVDGELIINPNVQQREVSVLDLQVA
GHFDAVNMVEAGAKEVAEDKMLEAIMFGHAEIKKLVEFQQSIIDEIQPVKSRFVPVETDT
ALESKVEQLSESFGLSQAIQTQEKLAREENITAIKLKVIEAFEGEGEAVITAVNKKFDAL
IKEEVRRLITEEKVRPDGRRPDEIRPLDSEVGILPRVHGSGLFTRGQTQALSVATLGALG
EHQIIDGLGVEEEKRYMHHYNFPNFSVGETGPIRAPGRREIGHGALGERALLQVIPDEKE
FPYTIRVVSEVLESNGSSSQASICGSTLALMDAGVPIKAPVAGIAMGLVTKDDNYTILSD
IQGMEDALGDMDFKVAGTKEGITAIQMDIKINGLTEDILREALEQARVGRLHIMEHMLST
ISEPRAELSQYAPKIEIIHINPDKIRDVIGPGGKKINEIIDATGVKLDIEQDGTVFIGSS
DASMIEEAKKLIENIVREAEVGQIYMATVKRIEKFGAFVEIFPGKDALVHISQIALERIN
KVEDVVKLGDQFLVKVTEIDKQGRVNASRKVLLEEEKKASEEK
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagaaaagaaagtttttaaaacagaatgggcaggtcgtccattaattattgaa
actggccagttagcaaagcaagcaaatggtgcagtactcgtacgctacggggatacggta
gtattatcaacggcgacagcaagtaaagaacctagagatgtggacttcttcccattaatg
gtcaattatgaagagaaattatatgcggcaggtaagatacctggaggattcaacaaacgt
gaaggccgtccaggtgaggatgctactttgacctcacgattgattgaccgcccgattcgt
ccgttattcccgaaaggttaccgtcatgatattcaggtcatttctatggttatgagtgta
gatccagataattcacctgaaatggcagcgatgatcggttcatctatggcactttcggtt
tcagatattccatttgaaggaccaatcgcaggtgtgaacgtaggtttagttgatggagaa
ctcatcataaatcctaatgttcagcagcgtgaagtttctgttctggacttacaagttgca
ggtcattttgatgcggtcaacatggttgaagcgggtgcgaaagaagtagcggaagataag
atgcttgaagcaatcatgttcggtcatgctgaaattaagaaacttgttgaattccagcaa
tcgatcattgatgagatacaacctgtaaagtctaggtttgtacctgttgaaacggataca
gccttagaatcgaaggtagagcaattatcagaaagctttggactatctcaggcgattcaa
actcaggagaagcttgcacgtgaagaaaatattacagcaatcaaattaaaggtcatcgaa
gcttttgaaggtgaaggtgaagctgttatcactgcagtgaacaagaagttcgatgcactg
atcaaagaagaagtgcgtcgtcttatcacagaagaaaaagtgcgtccggatggacgtcgc
ccagacgaaattcgcccgcttgattcagaagtcggcattttacctcgtgtacatggatct
ggtctatttacacgtggacagactcaagccctatctgtagcaacattaggtgcattaggt
gaacatcagattatcgatggtcttggtgtagaagaagagaaacgttacatgcatcactat
aacttcccgaatttctctgtaggtgagacaggaccaattcgtgcaccaggtcgtcgtgaa
attggtcatggtgcactaggtgaacgtgcgctattgcaagtcattccagatgaaaaagaa
ttcccatatacaattcgtgttgtatctgaagttttagaatcaaatggttcgagttcacaa
gcatcaatctgtggttctacgctcgccttgatggatgctggtgtaccaattaaagcacca
gttgcgggtattgcaatgggtcttgtaacaaaagatgataattatacgattctatctgat
attcaaggtatggaagacgcacttggtgatatggactttaaagttgcagggacaaaagaa
ggtatcacagcaatacagatggacattaagattaacgggttaacagaagatatcttacgt
gaagcattagagcaggcgcgagtaggtcgtctgcatattatggaacatatgttatctaca
atttctgaaccaagagcagaacttagccaatacgcacctaaaattgaaattattcatatt
aatcctgataagattcgtgatgttatcggaccaggtggtaagaaaattaacgaaattatc
gatgcaacaggagttaaacttgatattgaacaagatggtacagtcttcatcggttcaagt
gatgcatcaatgatagaagaggcgaagaagttgatcgaaaatattgtacgtgaagctgag
gttggccaaatttatatggcaacagtaaaacgtatcgagaagttcggtgcatttgttgaa
atcttcccaggtaaagatgcgctcgtacatatctcgcaaattgctttagaacgtataaac
aaagtagaagatgttgtgaagcttggtgatcagttcttggtgaaagtcactgagattgat
aaacaaggtcgcgtaaatgcatcacgtaaagtgctgttagaagaagagaagaaagcatca
gaagaaaagtag
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