Macrococcus psychrotolerans: QA539_05145
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Entry
QA539_05145 CDS
T10921
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mpsh Macrococcus psychrotolerans
Brite
KEGG Orthology (KO) [BR:
mpsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpsh03400
]
QA539_05145
DNA repair and recombination proteins [BR:
mpsh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QA539_05145
Archaeal homologous recombinant proteins
QA539_05145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_27
SMC_N
CALCOCO1
FtsK_SpoIIIE
Sec3_C_2
DUF961
TsaE
GTP_EFTU
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
WZE69940
UniProt:
A0AAT9P7Z1
LinkDB
All DBs
Position
1023985..1027011
Genome browser
AA seq
1008 aa
AA seq
DB search
MRPIKLEIQHFGPFKNETIDFKQLNNHTLFLISGKTGSGKTTIFDAMMYALYGTASTSSR
NHKAMRNKHAYDEEETMIKFQFSIKDKQYLIIRNLPHIKAGNKTPITSKLEVYEIHDNEK
RLISTNKKTETNQLIVDIVKLQADQFRQILILPQGEFKNFLVSDSESKNEILRTLFDTKH
LELMVKRLKENVDDKIDAIRMKEKEIEFHIQQLGVGFPPYMVTYDEQIRTANLYYEALQK
VFSQNISELNDKSNELKLKGDALKAAEILNNNIQSVKQHKHQLAMLYEQREEIENTQKTV
QQLVQFESYLSCISQLEKLKKDDAHLSVQKKDEEQQISENKDKLQQLKSALNEVMQDDEE
MKRLNHQLIEQERFVDEKYHGLEEDVNTLNELKNETTALSDKLSSTHQANETIQSSLEAL
IQEKTKLYEEKVKLQNHIRDNETIISLINEYDSHYKALQAIKENQDMLTEELLSCESLIE
RFNFGDDLLDIDAVDSIRAQLKIGQNCPVCNHIVTEKTDGVHHEYHNLVQRRMTLSREQE
ANATKIEWIEALMKAVTDKLLAYEQFKVTYKHEDMQNTGELLIHEQEMLTQKLETLNDHL
NHIDHEYEDLSNELKNNKASIISLKDVIDANEKKINERNGKKERYHTFVSFTGFKNYDDF
KAQFDEKRDLYENYDKHLNHLNETIASCSELIRSKENIVDKYNTHLIYNEKLLSQLESTK
NSFHISDKIVDEYMDKDIEQELETLQSAVESYYKDIHFHENTIKTLEDLIGGKKAPDIEK
LSNEYAELSSKAKAFEQAINDERSQLKLMNNIIMQLEVVHKSYVKQMEDIGSEIRLFEVL
NGKNTLKLSIENYVLVYYLEQILLLANERLLQMTHNRYKLVRKKEVHSRKKSGLEIEVFD
YHTNNVRDITTLSGGETFIASLSLALGLSDYVMQISGGINLESVFIDEGFGSLDSDTLET
AIEVLIELQQTGKLIGIISHVQSLQENMPAILKVRTDGFNSDTEFQLK
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgagaccgattaagttagagattcagcattttggaccatttaaaaatgaaacgattgac
tttaagcagctgaataaccatacactttttcttattagtggtaagacaggttcaggaaag
actaccatttttgatgcgatgatgtatgccctttatggcacggcgtccacttcttccaga
aatcataaggcgatgagaaataaacacgcatacgatgaagaagagacgatgattaaattt
caattttccatcaaggataaacaatatttaattattcgcaatttaccacacataaaggca
gggaataagacgccgatcacatctaaattagaagtttatgaaatccatgacaatgagaag
cgcttaatcagtaccaataaaaagaccgagacaaaccagctgattgtagatatcgtcaag
ctgcaggcagatcagtttagacaaatccttatactgccgcaaggggaatttaaaaatttt
cttgtatcagatagcgaaagtaagaatgagatattaagaacactgttcgatacgaagcat
cttgagctgatggtcaagcgattaaaggagaatgttgatgataaaatcgatgctataaga
atgaaggaaaaagagattgaattccatatacagcagctcggtgtcgggtttccgccatat
atggttacttacgacgaacagatccgtacagctaacttgtattacgaagcgttacaaaag
gtcttttcacagaacatatcagaattaaatgataaatcaaatgaactgaagcttaaagga
gacgccttgaaagcggcggagatattaaataataatatacaatctgtcaagcagcataaa
catcagctagcaatgttatatgaacagcgtgaagaaatagagaatacacaaaaaacggtt
cagcaactcgtgcagttcgaatcctacctttcctgtatcagtcagctggagaaattgaag
aaagatgatgcgcatttaagcgtgcaaaaaaaggatgaagaacaacagattagtgaaaat
aaggataagcttcagcaactgaaaagtgcattaaacgaagttatgcaagatgatgaagaa
atgaagcggctcaatcatcaattaatagaacaggaaagatttgtcgatgaaaaataccat
ggtctagaagaagatgtcaatacgctaaatgaactgaaaaatgaaacgacagcattgagc
gataagctatcaagtacacatcaagcaaatgagaccattcaaagttccctagaagcgttg
attcaagaaaagacaaaattatatgaagaaaaggtgaagcttcagaatcatattcgtgat
aatgaaacgattatctcattgatcaacgaatatgattcacattataaagcattgcaagcg
attaaagaaaatcaggacatgctaacagaagaactattgtcatgtgaatcacttatcgaa
cgttttaatttcggagatgatctgctggatattgatgcagtggactctattcgtgcacaa
ttgaaaataggtcaaaattgtccggtgtgtaatcatatcgtcaccgagaaaacggatggt
gttcatcatgaataccataaccttgtacaaagaaggatgacgttgtcacgtgaacaagag
gccaatgcaactaagatagagtggattgaagcgttgatgaaggcagtcaccgataagtta
cttgcatatgagcagtttaaagttacttataaacatgaagatatgcaaaatactggtgaa
ctgcttattcatgaacaagagatgttaacgcagaaacttgaaacgctcaatgaccattta
aatcatatcgatcacgagtacgaggacctgagtaatgaacttaaaaataacaaagcctcc
attatctccttaaaagacgttatcgatgcaaatgagaaaaagatcaatgaacgcaatggt
aaaaaagagcgatatcatacatttgtatcattcacagggtttaagaattatgatgatttc
aaggctcagtttgatgagaaaagggatctctatgaaaattatgataagcatctgaatcat
ctaaacgaaacgattgcctcttgttcagaactcatccgatcaaaagagaatatcgtggat
aaatataatacccatcttatctataacgaaaaattattaagccaattagaatcaacaaaa
aactcatttcatatatcggataaaatagtggatgaatatatggacaaagatatagagcaa
gaactagaaacgttgcagagtgctgttgaaagttattataaagatattcattttcatgaa
aatacgataaagaccttagaggatttgattggcggaaaaaaagcccctgatattgaaaag
ctgtcaaatgaatatgctgagctatcgtctaaagcgaaagcgtttgaacaagcaatcaat
gatgagcgtagtcagttaaagctgatgaacaatatcataatgcagctggaagtagtacat
aaaagttatgtcaagcagatggaggatataggttctgagatcagacttttcgaagtactg
aacggaaagaatactttaaaactatcaatcgaaaattatgtgctcgtatactatctggaa
caaatacttctgttagctaatgaaaggttacttcagatgacccataaccgatacaagctc
gtaaggaaaaaggaggttcactccagaaaaaaaagtgggcttgaaattgaagtcttcgat
tatcacacaaataatgtgagggatattacaacgctttctggaggtgaaacatttatcgcc
tctttatcattagcgctaggcttaagtgattacgtcatgcagatttcaggtggaatcaat
ctggagtcggtgttcattgatgaaggtttcggaagtttagatagtgatacgcttgagaca
gcgattgaagttctgatcgaactccagcagaccggaaaactgatcggtataattagtcat
gtacaatcgctccaggaaaatatgcctgcgatattaaaggttagaactgacggttttaat
agtgatacagaatttcagttgaagtaa
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