Macrococcus psychrotolerans: QA539_06660
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Entry
QA539_06660 CDS
T10921
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mpsh Macrococcus psychrotolerans
Pathway
mpsh03410
Base excision repair
mpsh03430
Mismatch repair
mpsh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QA539_06660 (recJ)
03430 Mismatch repair
QA539_06660 (recJ)
03440 Homologous recombination
QA539_06660 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpsh03400
]
QA539_06660 (recJ)
DNA repair and recombination proteins [BR:
mpsh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
QA539_06660 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
QA539_06660 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
QA539_06660 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WZE70217
UniProt:
A0AAU6RJ15
LinkDB
All DBs
Position
complement(1302605..1304866)
Genome browser
AA seq
753 aa
AA seq
DB search
MDKTVWTVKQPVDTIPAALIKKYHITEINKKILESRHIVTDAALHDIFAADDIHDPFAMH
DMSKAVKRIKTAIDNNEMILVYGDYDADGVTSVTVLVDSLKSIGANVGWYIPNRFTEGYG
PNEQAFREASDAGVSLIITVDNGIQGHHEVNIVNELGIDVIITDHHEIGQTLPDAYAILH
PMHPDGSYPFHHLAGVGVSYKLACALNEQMNEHLLGFVAIGTISDLVSLTGENRALVKRG
LKALNVHTPMGLKALLKQAAFNGEITEETVGFIIGPRLNAVGRLDDARLACELLQIDNED
EAEWMSEQVDQFNIERKEIVSSITEQALIDVEEKIAKGNRFIVVAKEGWNEGVLGIVASR
ITEQYHLPAIVLNIDYDNGYAKGSARSIAQVSMYDSLDASRNLITKFGGHHMAAGMTLPI
ENIEQLEKALNDYLDTRIHGEIIQEIEIDAAIEMSDITVKNINDMDKLRPFGTDFSAPLL
SLMNAELTDVKQIGQNQAHLKMTVQNTLNALMWNEGARMSELPVGSQVKLAGTLQLNEWN
GNVQPQMIVRHIKQDAMQMIDFRNVHPNSYKFLKDERAALIIHPRKNKLNEHYFHYGETI
SGYDKVIFRDLPDSEEKFLDTYNSVDATLIYFIFHTPRQLYFEGMPTAEKFKLLYKCIMI
KPEIDLEKEGSYLLQTINVSPDTLLFMLDVYHELGLIIKEGQLIKKQEVDKKVDLSSSST
YQARLNQLKLESKLLFSSFDELKQFILSNNSLS
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
gtggataaaactgtatggacagtcaaacaacctgtagatacaattcctgcagcgttaatt
aaaaaatatcacatcactgaaattaataagaaaatattagaatctcgtcatattgtgacg
gacgcagcattacatgatatttttgcagcagatgacattcatgatccatttgctatgcat
gacatgagtaaggcggttaagcgtattaaaaccgcaatagataataacgaaatgatactc
gtttatggagactatgatgcagatggtgtgacgagcgtcactgttctcgttgatagcttg
aagtctatcggtgcaaacgtaggctggtacattccgaatcgttttacagaaggctacgga
ccaaatgagcaggcttttcgtgaagcgagtgatgcgggtgtatctttaatcattacggtt
gataacgggatacaaggtcatcatgaagtaaatattgtgaacgaactagggatagatgta
attattacagatcatcatgagattggtcagacgcttccagatgcttatgcaattctgcat
ccgatgcatccagatggcagctatccctttcatcatcttgcaggtgttggggtgagctat
aagcttgcatgtgcattaaacgaacagatgaatgagcacttacttggatttgttgcgatt
ggtacaatcagtgatcttgtatcattgacgggtgagaatcgagcgctcgtaaagcgtgga
cttaaagccttaaatgtgcatacaccgatgggcttgaaggcattacttaagcaagcggct
tttaatggtgaaatcacagaagaaacagtcggatttattataggtccgagactgaatgca
gtcggtagattagatgatgcacgattagcatgcgaattactgcagatagataatgaagat
gaagcagaatggatgagcgaacaagtcgatcagttcaatattgaacgtaaggagattgta
agctcaattactgaacaagcattgatagatgttgaagaaaaaattgcgaagggcaatcgt
tttatcgttgttgcgaaggaaggctggaacgaaggtgtacttggtattgtcgcaagtaga
attacggagcagtatcatttacccgcaatcgtattgaacattgattatgataatggctac
gcgaaaggctctgcaagaagtattgcgcaagtatcgatgtatgacagtcttgatgcatcg
agaaatcttattactaaatttggtggacatcatatggcagcagggatgacattgcccatt
gaaaatattgaacagctcgaaaaagctttgaatgactatttagatacacgtattcatggt
gaaatcattcaggaaatagaaattgatgctgctattgaaatgtcagatattacagtgaag
aatattaatgatatggataaacttcgaccgttcggaacagacttcagtgcgccgttactc
tcattaatgaatgctgaactaacagatgtgaagcagattggacagaaccaggcacatcta
aagatgactgttcaaaacaccctgaatgcacttatgtggaatgaaggggcaagaatgtca
gaacttccagtaggcagtcaagtgaaattggcaggtacgctgcagctgaacgaatggaat
ggtaacgttcagcctcagatgattgtgcgtcatataaagcaggacgctatgcagatgatt
gattttagaaatgtacacccaaattcatacaagtttttaaaggacgagcgtgctgcattg
attattcatccacgtaaaaataaattaaatgaacattattttcactatggcgaaacgata
tcgggttatgacaaagttatcttccgtgatcttccggatagtgaagaaaagtttttagat
acgtataacagtgtggatgcgacattaatctattttatatttcacacaccaagacaatta
tattttgaaggtatgccgacagcagaaaaatttaagctgctatataaatgtatcatgata
aagccagagattgatctggaaaaagaaggcagttatttactacagacaataaatgtgtca
ccggatactttgttgtttatgctggatgtgtatcatgaacttggccttattattaaagaa
ggtcaacttataaaaaagcaggaagttgataaaaaggtcgatttatcgagctcaagtact
tatcaagcacgattaaatcagttaaaattagaaagtaagctattgttttcatcattcgat
gaattaaaacaatttatcttatcgaataactcattgtcctag
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integrated database retrieval system
