Macrococcus psychrotolerans: QA539_09345
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Entry
QA539_09345 CDS
T10921
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mpsh Macrococcus psychrotolerans
Pathway
mpsh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpsh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QA539_09345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpsh03019
]
QA539_09345
03009 Ribosome biogenesis [BR:
mpsh03009
]
QA539_09345
Enzymes [BR:
mpsh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QA539_09345
Messenger RNA biogenesis [BR:
mpsh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QA539_09345
Ribosome biogenesis [BR:
mpsh03009
]
Prokaryotic type
rRNA helicases
QA539_09345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_30
Flavi_DEAD
Cas3-like_C_2
AAA_19
SUa-2TM
MTPAP-like_central
Motif
Other DBs
NCBI-ProteinID:
WZE70678
UniProt:
A0AAU6R916
LinkDB
All DBs
Position
complement(1791651..1793147)
Genome browser
AA seq
498 aa
AA seq
DB search
MQKFRDLGISEPTINALEKLGFTEPTPIQTDSIPHTMAGRDVLGQAQTGTGKTGAFGIPL
IEKVKDREGIQSLILAPTRELAVQVAEQLKAFSRGQGIQVTTVFGGMPIDRQIRELKKKP
QIVVGTPGRVIDHLNRRTLKTEDINTLILDEADEMMNMGFIDDMRFIMDKLPKENRQTML
FSATMPKAIQELVQKFMKNPVIVKTMTNNDSDPSIEEFYTIVKELEKFDTFTNFLDVHQP
ELAIVFGRTKRRVDELTSALISKGYRAEGLHGDITQAKRLEVLKKFKNDQIDILVATDVA
ARGLDISGVTHVYNFDIPQDVESYTHRIGRTGRAGKHGMAISFVNPVEMDYIRQIEKAKN
RQMQALRPPTPGEVMKAREQDVKSKVKAWVEANTEARIESIAKELIEEYGDVKLVASLLQ
ELIQSNNDVDVQLTFEKPLGRKGGGKSFRGGRSGNRSGGGNRNRKDGKDNRRKAFDRGSK
APKAKKTFKGRTFADHKK
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaaatttagagacctaggtatcagcgaacctaccataaatgcgctggagaagttg
ggatttacagaacctacaccgattcaaacggatagtatcccacatacgatggctggccgt
gacgtactaggccaagcgcaaactggtactggtaaaactggtgcattcggtataccttta
attgaaaaggttaaagaccgtgaagggatccaaagtttaatcctggctccaacacgtgag
ttagctgtacaggttgcagagcagttgaaagctttcagtcgtggacaaggaatccaagtt
acaactgtattcggtggtatgccgattgaccgtcagattagagaacttaagaagaaacct
caaatcgttgtagggacaccgggtcgtgtcatcgaccatttaaatcgtcgcactttaaag
actgaagatatcaatactttaatcttagacgaagctgacgaaatgatgaacatgggattc
atcgatgatatgcgttttatcatggataaattaccgaaagaaaatcgtcagacgatgctt
ttctcagcaacaatgcctaaagcaattcaagaacttgttcaaaagttcatgaaaaaccca
gttatcgtaaaaacgatgacaaacaacgattcagatccttcaattgaagagttctacaca
atcgttaaagaattagagaaatttgatacatttacaaacttcttagatgtacaccaacca
gaacttgcaatcgtattcggacgtacaaaacgtcgtgtagacgaattgacaagtgcatta
atttctaaaggttaccgtgctgaaggactacacggtgatattactcaggcgaaacgtctt
gaagtattaaagaaatttaaaaatgaccaaattgatattcttgttgcaactgacgtagca
gcacgtggattagatatttcaggtgtaacgcatgtttacaactttgatattcctcaggat
gttgaaagttatacacaccgtatcggacgtacaggacgtgcaggtaagcatggtatggcg
atttcattcgttaatccagttgaaatggattatatccgtcaaattgaaaaagcgaaaaat
cgtcaaatgcaggcattacgtccaccaacaccaggtgaggttatgaaagcacgtgaacaa
gatgttaaatctaaagtaaaagcttgggttgaagcaaatactgaagcacgtatcgaatca
atcgcgaaagaattaatcgaagagtacggtgatgtgaaattagtagcatcattgttacaa
gagttaattcaatcaaataacgatgttgatgttcaattaacattcgaaaaaccacttgga
cgtaaaggtggcggtaaatcattccgtggtggccgttcaggtaaccgctcaggtggcggt
aaccgtaatcgtaaagatggtaaagataaccgtcgtaaagcgttcgatcgtggaagtaaa
gcacctaaagcgaaaaaaacatttaaaggcagaaccttcgcagatcacaaaaaataa
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