Methylovulum psychrotolerans: CEK71_00630
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Entry
CEK71_00630 CDS
T04929
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mpsy
Methylovulum psychrotolerans
Pathway
mpsy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CEK71_00630 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpsy03021
]
CEK71_00630 (rho)
03019 Messenger RNA biogenesis [BR:
mpsy03019
]
CEK71_00630 (rho)
Transcription machinery [BR:
mpsy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CEK71_00630 (rho)
Messenger RNA biogenesis [BR:
mpsy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CEK71_00630 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_22
OB_RNB
S1CSD-TOTE-2
Spore_III_AA
AAA_25
Mor
AAA
Motif
Other DBs
NCBI-ProteinID:
ASF44687
UniProt:
A0A1Z4BTQ6
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All DBs
Position
complement(125021..126277)
Genome browser
AA seq
418 aa
AA seq
DB search
MNLTELKLKQISEVIDIAESLGLESVARSRKQDLIFAILKKQAKAGDDIYGDGVLEILQD
GFGFLRTPGCSYLAGPDDIYVSPSQIRRFSLKTGDTISGKIRPPKDNERYFAMLKVEQIN
FEPPENTKNKIYFSNLTPLFAKERFVLEQGNGTSEDLTGRIIDLIAPIGKGQRGLIVSPP
KAGKTMILQSLAQAIAEQNPECYLIVLLIDERPEEVTEMERCVRGEVISSTFDEPAVRHV
QVAEMVIEKARRLVEHKHDVVILLDSITRLARAYNTVVPSSGKILTGGVDANALEKPKRF
FGAARNIEEGGSLTIIATALVDTGSRMDEVIYEEFKGTGNMELHLDRKIAEKRIYPAINI
NRSGTRREEYLVDPDTLQKTWILRKILQPMDETAASEFLIGKLKDFMTNAEFFDSMKR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgagttaaagcttaagcaaatcagtgaagttatagacatcgccgagtct
ttgggactggaaagtgtcgccaggtcacgcaaacaggatttaatttttgccatccttaaa
aaacaggcaaaagcaggcgacgatatttatggcgacggcgttctggaaattttacaagat
ggttttgggtttttacggactccaggttgctcctatcttgccggccccgatgacatttac
gtttcccccagccaaatccggcggttttccttaaagacgggcgataccatcagcggtaag
atccgtccccctaaagataacgaacgttattttgccatgctgaaggtggagcaaatcaat
tttgagccgcccgaaaacacgaagaacaaaatttacttttctaacctcacgcctttgttt
gccaaagagcgttttgtgcttgagcagggtaacggtaccagcgaagatttgaccggacgt
attatcgacctgatcgccccgattggtaagggtcagcgtggcctgattgtgtcgccgccg
aaagcgggtaagaccatgatcctgcaaagcttggcgcaggccattgccgaacagaatccc
gaatgttacctgattgtgctgctgattgacgaacgtcctgaagaggtcacggaaatggag
cgttgtgtgcgcggcgaagtcatttccagtacctttgacgagcctgctgtgcgccacgtc
caggtggccgaaatggttatcgaaaaagcccgccgtttggttgagcataaacacgatgtg
gtcattttgttagactccatcacccgtttggcccgcgcgtacaataccgtcgtgccgtca
tcgggtaagattttgacgggcggtgtcgatgccaatgctttagaaaaaccgaaacgcttt
ttcggggcggcgcgtaatatcgaggaaggtggcagtttgaccattatcgccacggcgctg
gtcgataccggttccagaatggacgaggtcatttacgaagagtttaagggtacgggtaat
atggagttgcatctggaccgtaaaatcgccgaaaaacgcatttatccggcgattaacatt
aaccgttcaggtacccggcgcgaagagtatttggttgatcctgacaccttgcaaaaaact
tggattttgcgcaaaattctccagcctatggacgaaacggccgcatcggagtttttgatc
ggcaaattgaaggattttatgaccaatgccgagttttttgactcgatgaagcgttaa
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