Methylovulum psychrotolerans: CEK71_02430
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Entry
CEK71_02430 CDS
T04929
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mpsy
Methylovulum psychrotolerans
Pathway
mpsy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CEK71_02430 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpsy03019
]
CEK71_02430 (recQ)
03400 DNA repair and recombination proteins [BR:
mpsy03400
]
CEK71_02430 (recQ)
Enzymes [BR:
mpsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CEK71_02430 (recQ)
Messenger RNA biogenesis [BR:
mpsy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CEK71_02430 (recQ)
DNA repair and recombination proteins [BR:
mpsy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CEK71_02430 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
HTH_40
ResIII
BTRD1
Motif
Other DBs
NCBI-ProteinID:
ASF45010
LinkDB
All DBs
Position
complement(584964..587093)
Genome browser
AA seq
709 aa
AA seq
DB search
MASNAQNTPLHVLKTVFGYDGFRGQQQAVIDHLLAGQDALVLMPTGGGKSLCYQIPALLR
PGVGIVVSPLIALMQDQVSALLQLGVKAAFLNSTLAQQEARRIEQQLLNGELDLLYVAPE
RLASEYTRSLFGKIKIALFAIDEAHCVSQWGHDFRADYLQLSMLHERFPDIPRIALTATA
DERTREEIVLRLGLGHAPLFQSGFDRPNICYRIVQKQNARQQLLTFIRAEHAGDAGIVYC
LSRKKVEETAIWLSSKGVNALPYHAGLSADVRYQNQHRFLMQEGLVIVATIAFGMGIDKP
NVRFVAHLDLPKSVEAYYQETGRAGRDGLAANAWMAYGLQDVITLRKMLAESQSDEAHKR
LEYHKLDAMLALCEQVHCRRQSLLSYFGDQLEQPCGNCDTCMEPVQTWDGTLAAQQALSC
IYRTQQRFGVAYLIDVLLGKQTARISQFGHQQLSTYGIGKALDEQQWHSVFRQLVARGLV
SVDFDGYGALQLTDTCRPILRGEQQLMLRKDVKPEKIKATKSGQTTGGMSDLWDALRAKR
KQIADAQDVPPYVIFHDATLMAMMEAKPANLRDMARISGIGTRKLEQYGEQFLEVLQRFR
DAADDASDTVSESVKLIRLGFSVSQTAQKRSLRENTIYAHMAQALEQGMVLLSDVVDLPE
AELKTIEVALLDLPEEQKNALKPIFDQFAGQYSYEVLRCIRAALWHRVG
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggctagcaacgcacaaaatacgccgctccacgttttgaaaacggtgtttggttatgac
ggtttccgtggtcagcaacaggcggtcattgaccatctgttggcggggcaagacgctttg
gtgctgatgccgacgggtggcggcaaatccttatgttaccagattcctgccttgcttagg
ccgggcgtgggtattgtcgtatcgccactgattgcgctgatgcaggatcaggtcagtgcc
ttgttgcaattgggcgtaaaagcggcgtttcttaattcgaccttagcgcagcaagaagcc
cggcgcatcgagcagcaattgctcaatggcgagttggatttgctttatgtcgcgccggag
cggctggcctcggaatatacccgtagtttgttcggtaagatcaaaatcgcgttgtttgcc
attgacgaagcccattgcgtctcgcaatgggggcatgatttccgtgccgattatctgcaa
ctgtccatgttgcatgagcgtttccctgatattccgcgcatagccttaacggccaccgcc
gatgagcgtacccgtgaagaaattgtcttacgtttgggtttaggccatgcgccgttattc
caaagcggttttgaccgtccgaatatttgctaccgtattgtccaaaaacaaaatgcccgc
cagcaattgttgacgtttatccgcgctgaacatgccggggatgcggggattgtttattgt
ctgtcgagaaaaaaagtcgaagagacggcaatctggctaagcagcaagggcgttaatgcc
ttgccttatcatgccggtttaagtgcggacgtacgttaccagaaccagcaccggtttttg
atgcaggaaggcttggtgattgtcgcaactattgcttttggtatgggcatagataagccg
aacgtgcgctttgtcgcgcatttggatttgcctaaaagcgttgaggcgtattatcaggag
acgggcagggcgggtcgtgacggcttggcggcgaatgcgtggatggcttatggtttgcaa
gatgtgattactttgcggaaaatgctggccgaatcgcagtccgatgaggcgcataagcgg
cttgaataccataagcttgatgccatgctggctttatgcgagcaggtgcattgccggcgg
caaagcctgttaagctattttggcgaccaattggaacagccgtgcggcaattgcgacact
tgtatggaacccgtgcaaacctgggacggcaccttggcggcacagcaggccttatcgtgc
atataccgcacccagcaacgctttggggtggcgtatttgattgatgtgctgttaggtaag
caaacggctcggatcagccaatttggccatcagcaattgtccacttatggtatcggtaag
gcgttggatgagcagcaatggcattcggtgttccggcaattggtcgcgcggggcttggtc
agcgtcgatttcgacggttacggtgcgttgcaattgaccgatacctgccgcccgattttg
cgcggcgaacagcagttaatgctgcgcaaagatgttaagccggagaaaatcaaggccact
aaatccggtcagacgacgggggggatgagcgatttgtgggatgccttacgcgccaagcgc
aaacaaattgccgatgcccaagatgtgccgccttatgtgatttttcatgatgccacttta
atggcgatgatggaggccaagcctgccaatttacgcgacatggcaagaatatccggcatc
gggacccgtaagttggagcaatacggcgagcagtttttagaggtgctgcaacgctttagg
gatgccgcagatgacgcttccgatacggtcagcgaatcggtcaaactgatccgcttgggg
tttagcgtttcgcaaaccgcccaaaaacgcagtttgcgggaaaacaccatttatgcgcac
atggcacaagctttggagcaggggatggtgttgctcagcgatgtcgtggatttgccggaa
gcagagctaaaaaccattgaagtggcgttgctggatttgcccgaagagcagaaaaatgcc
ctgaaaccgatttttgaccagtttgccggacagtattcttatgaggtgttgcgttgcata
cgcgcggctttatggcatagggtagggtga
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