Methylovulum psychrotolerans: CEK71_02595
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Entry
CEK71_02595 CDS
T04929
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mpsy
Methylovulum psychrotolerans
Pathway
mpsy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CEK71_02595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpsy03019
]
CEK71_02595
03009 Ribosome biogenesis [BR:
mpsy03009
]
CEK71_02595
Enzymes [BR:
mpsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CEK71_02595
Messenger RNA biogenesis [BR:
mpsy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CEK71_02595
Ribosome biogenesis [BR:
mpsy03009
]
Prokaryotic type
rRNA helicases
CEK71_02595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
Cas3-like_C_2
GMT-wHTH
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
ASF45041
UniProt:
A0A1Z4BUR0
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All DBs
Position
complement(625357..627156)
Genome browser
AA seq
599 aa
AA seq
DB search
MLNDVSTLPSFRDLALTESVLKALEDVGYETPSPIQAQVIPHMLAGKDVLGQAQTGTGKT
AAFALPILSRIDLKQKDPQVLVLAPTRELAIQVAEAFQRYAAHLKGFHVLPIYGGQDYST
QLRQLKRGAHVVVGTPGRVMDHMRKGTLNLDGLTTLVLDEADEMLRMGFIDDVEWILEQT
PDERQIALFSATMPTVIRKIAQEYLYEPEQVTIKVTTASAENIRQRYWVVSGIHKLDALT
RILEVETFDGMIIFVRTKTATVELAEKLEARGYSAAAINGDMSQALRERAINNLKNGKLD
ILIATDVAARGLDVDRITHVVNYDIPYDTESYVHRIGRTGRAGRTGDAILFIAPRERKLL
LNIEKATKQKVEEMGLPSTEVINNKRISRFKQNITDTLAAEELSFFSQLVEQYQQEHNVS
ALEIAAALAKLVQGDTPLLVQNLPKKARERDDAPMRSDREDRPRRDRDRGDRGDRERAPR
RDFGGSDIEMEVFRIEVGHAHGVKPGNIVGAIANEAGIDGKHIARIKIEEDYSTVELPAG
MPKELIQDLRKVRVAGQPLNISKMEAGAGRYADDGAKKTDKTKKRVGSPSRRAKPKAEE
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgctcaatgatgtttctacattaccctctttccgtgatttggcgctgacagaatcggtg
ctcaaggcactggaagatgtcggttatgaaacaccttcgccgattcaggcacaagttatc
ccacacatgctcgcaggaaaggatgtattgggacaagcacaaacaggcaccgggaaaacc
gctgcgtttgcgttgccaattttatcgcgcatcgatcttaagcaaaaagatccgcaagtg
ctggtgttagctccgacccgtgaactggctatccaagtagccgaagcttttcaacgttac
gccgcccatttaaagggatttcatgtcctgccgatttatggcgggcaagattacagtacc
cagttgcggcaattaaaacgcggtgcgcatgtcgtggtcggtacgccgggccgtgtgatg
gaccacatgcgcaaaggcacattgaatttggatggcctgactacgttggtgttggatgag
gccgatgagatgttgcgcatgggctttattgatgatgtcgaatggattttggaacaaacc
ccggatgagcggcaaatcgcgctgttttccgccaccatgccgacggtcatccgcaaaatc
gcccaagaatatctgtatgagcccgaacaggtcacgattaaggtgacgacggcttcggcg
gaaaatatccgccaacgctattgggtggtcagcggcatccataaattagatgccttgacc
cgtatcttggaagtcgagactttcgacggcatgattattttcgtcaggactaagacggcg
accgtcgagctggcggaaaaattggaggcgcggggctattcggcggcggcgattaacggt
gatatgtcgcaagcgttgcgtgagcgggcgatcaataacctgaaaaacggcaagctggac
attctgattgccaccgatgtcgcagcacggggtttggacgttgaccgtatcacccatgtc
gtcaattatgacatcccttacgataccgaatcttacgtccaccgtattggccgtactggc
cgtgcgggccgtactggggatgcgattttgtttatcgccccgcgcgagcgcaaattgttg
ctgaacattgaaaaggcgactaagcaaaaagttgaggaaatgggcttgccgtctacggaa
gtcattaacaataagcgtatttcccgctttaagcaaaatatcaccgataccttggcggcg
gaagagttgagctttttcagccaattggttgagcagtaccagcaggaacataatgtctcg
gcgctggagattgccgccgctttggctaagttggtacagggcgatacgccgttgttagtg
caaaacttgccgaaaaaagcgcgtgagcgcgatgatgcgccaatgcgtagcgaccgtgaa
gaccgtcctagaagagaccgtgaccggggtgataggggcgaccgtgagcgcgcaccgcgc
cgtgattttggcggctctgatatcgaaatggaagtgttccgcatcgaagtcggccatgcc
catggtgtcaagccaggcaatatcgtcggggcgattgccaacgaggcgggtattgacggt
aagcacatcgcacggattaaaatcgaagaagattacagtacggtcgagttgcctgcgggt
atgccgaaagagctgatccaggacttgcgtaaagtccgtgtggccggtcagcctttgaac
atttccaaaatggaagcgggtgctggcaggtatgctgatgatggggcaaaaaaaaccgat
aaaaccaaaaaacgtgtcggctcaccttccagacgtgctaagccaaaggcggaagaataa
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