Methylovulum psychrotolerans: CEK71_05100
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Entry
CEK71_05100 CDS
T04929
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mpsy
Methylovulum psychrotolerans
Pathway
mpsy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mpsy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CEK71_05100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpsy03021
]
CEK71_05100
03400 DNA repair and recombination proteins [BR:
mpsy03400
]
CEK71_05100
Enzymes [BR:
mpsy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CEK71_05100
Transcription machinery [BR:
mpsy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CEK71_05100
DNA repair and recombination proteins [BR:
mpsy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CEK71_05100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
Hus1
MiaE_2
Motif
Other DBs
NCBI-ProteinID:
ASF45493
UniProt:
A0A1Z4BW68
LinkDB
All DBs
Position
complement(1152469..1153485)
Genome browser
AA seq
338 aa
AA seq
DB search
MQNSISGLLKPRLVEVVNKTPNHSRIVIEPLERGFGHSLGNALRRVLLSTIPGCAVTDVE
IEGVLHEYTTIEGVQEDVIDILLNLKKLAVILHSKDEVELTLSKNGAGSVLAGDITLPHD
VEIVNPDLVIANLTQAGVLNMKIRVRRGRGYEPVSVRKALQGYNAPAMGSLQLDASYSPV
MKVAYQVESTRVEQRTNLDKLIIELETNGTVDPEQTIKLAATILHEQLSVFVDFEKVNDQ
LEEEKVEVEEIFEPVLLRPVDDLELTVRSANCLKAENIFYIGDLIQRTEVELLKTPNLGK
KSLTEIKDILALKGLSLGMRLENWPPDNLADQSHSTTH
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcagaattctatttctggcttattgaagcctcgtcttgttgaggttgtaaataaaacc
cctaaccattcaagaattgttattgagccgcttgaacgtggctttggccattctttaggt
aatgccttgagaagggttttgctgtcaactattccaggttgtgcagtcactgatgtagag
attgaaggcgtacttcatgaatacaccaccatcgaaggcgttcaggaagatgttatcgac
attctgcttaatttgaaaaaattggcggtaatcctacattcaaaagatgaagtcgagctt
accctgtctaaaaatggcgcaggcagcgttttggcgggtgatattactctgccgcacgat
gtcgaaatcgtcaaccctgatctggtgatcgccaacttgacccaagctggcgtattgaac
atgaagatcagagtgcgtcgtggccgtggttacgagcctgtcagtgtgcgtaaggcgttg
caaggctataacgcgcccgccatgggttctttgcagttggatgcctcatacagcccagtt
atgaaagtggcttatcaggttgaaagcacccgtgtcgaacagcgtactaatttggacaaa
ctgattattgagttagagacaaacggaactgtcgatccagagcagactattaagctcgcc
gcaactatcttgcatgagcaattgtctgtctttgttgattttgaaaaagtcaatgatcag
cttgaagaagagaaagtggaagttgaagaaatcttcgaacctgtattgcttcgtccggtt
gatgatcttgaattgactgtccgttcagccaattgcttaaaagccgaaaatattttctat
attggtgatttgatccaacgtaccgaagtcgagctgttaaaaacgcctaaccttggtaag
aaatcattgaccgagataaaagatatactggcattgaaaggcttgtcgttgggtatgcgc
ttggagaattggccgcctgacaatctggccgaccaatcccattcaacaacacattaa
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