Methylovulum psychrotolerans: CEK71_05255
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Entry
CEK71_05255 CDS
T04929
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mpsy
Methylovulum psychrotolerans
Pathway
mpsy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mpsy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CEK71_05255 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpsy03021
]
CEK71_05255 (rpoC)
03400 DNA repair and recombination proteins [BR:
mpsy03400
]
CEK71_05255 (rpoC)
Enzymes [BR:
mpsy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CEK71_05255 (rpoC)
Transcription machinery [BR:
mpsy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CEK71_05255 (rpoC)
DNA repair and recombination proteins [BR:
mpsy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CEK71_05255 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Peptidase_M23
Apocytochr_F_C
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
ASF48651
UniProt:
A0A1Z4C527
LinkDB
All DBs
Position
complement(1169906..1174090)
Genome browser
AA seq
1394 aa
AA seq
DB search
MNFLKRQGRADDFDGISIGLASPDMIRSWSYGEVKKPETINYRTFKPERDGLFCAKIFGP
VSDYECLCGKYKRLKHRGVICEKCGVEVTLSKVRRERMGHIDLASPVAHIWFLKSLPSRI
ALLLDMTLREIERVLYFESFVVLDPGMTPLDKGQLLTDDEYLDAVELHGDDFIAKMGAEA
IYELLKAIDLQEQVNILREEINSTSSETKIKKYAKRLKVMDALLSSKNRPEWMILQVLPV
LPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLNRLLDLNAPDIIVRNEKRMLQESVD
ALLDNGRRGRAITGTNRRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPTLRLH
QCGLPKKMALELFKPFIFSKLQFRGLATTIKAAKKMVEREGTEVWDILEEVIREHPILLN
RAPTLHRLGIQAFEPTLIEGKAIQLHPLVCSAFNADFDGDQMAVHIPLSIEAQLEARTLM
MATNNILSPANGEPVINPSQDVVLGLYYISREKINARGDGSIFVDTGEIHKALQAKSVEL
QAKIELRITQKFLNDKGEKESKTYRVKTTVGRALIWEVVPDLMPYELVNCDMTKKNISRL
INYSYRYLGNKETVVLADQLMYLGFRYATISGVSFGIEDMAIPAKKVDIIAAAEAEVNEI
QSQYSSGLVTDGERYNKVVDIWSHANDQVAKVMMDGLGEESVVDAQGNTVKQKSFNSIFM
MAESGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLDVLQYFISTHGARKGLA
DTALKTANSGYLTRRLVDVAQDLVITGQDCGTKDGLVMMPIIEGGDVVEPLSERVLGRVV
VNDVMDPANENIIVPAGTLLNEHWVSVLDEHSVDQLIVRSVITCENRHGVCAACYGRDLG
RGHHVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRSAAISNVQVKSAGTVRLSNLK
SVANREGNLVAVSRSGEVCVVDDYGRERERYKIPYGAVLSVQEGSKISAGDIIVTWDPFT
HPVITEVDGIVELVNFVDGVTVQKQSDEVTGLSSLVVTDPKQRGSAGKELRPMVKLLDHD
GNGIYLPGTEIPAQYFLPAGAIAGIKDGGEVKVGDVLARIPQESSKTRDITGGLPRVADL
FEARKTKDPAILAETSGTISFGKETKGKQRVIITDAQGEQVETLIPKWRHITVFEGEYVE
KGETIAEGELTPHDILRLRGIEELANYLVKEIQDVYRLQGVKINDKHIECIIRQMLRKVE
ITASGDTAFLKGDQVERAAVRFENERIENEGKIPASFESVLLGITKASLATESFISAASF
QETTRVLTDAAVRGLSDSLQGLKENVIVGRLIPAGTGLAYHENRKNRFAQQHLAETASAT
VVDTEEALKQALNI
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcttaaaacgccaaggtcgtgccgacgattttgacggtattagcattggtttg
gcctcgccagatatgatccgttcttggtcttacggtgaagtgaaaaaaccggaaaccatc
aactaccgtactttcaagcctgagcgtgacggcttgttttgcgccaagatttttggtccg
gtcagtgactatgaatgtctgtgcggtaagtacaagcgtctgaagcaccgtggggtgatt
tgtgagaaatgcggcgttgaagtcactttgtcaaaagtccgccgtgaacgcatgggccat
atcgacttggccagtccggtcgcgcatatttggtttttaaaatcgttaccgtcgcggatt
gccttgttgttagacatgactttgcgcgaaattgagcgggtcttgtacttcgaatctttc
gtggtcttggatccgggtatgacccctttggacaaaggccagttgctgaccgatgacgaa
tatctggatgcggtcgagttgcatggtgatgatttcatcgccaagatgggtgcggaagcg
atttatgaattgctcaaagccattgatttgcaagagcaggtcaatatcttgcgggaagag
attaactcgaccagctcagaaactaaaatcaagaaatacgccaaacgcctgaaggtcatg
gatgctttattaagctccaaaaaccgccccgaatggatgatcttacaagtgttgccggta
ttgccgcccgaattgcgccctctggtgccgttggacggtggccgttttgcgacctctgac
ctgaacgacctgtaccgccgcgtcatcaaccgtaacaaccgtctgaaccgcttgttggat
ttgaacgccccggacatcatcgtgcgcaacgaaaagcgcatgttgcaagagtctgtagat
gccctgttggataatggccgtcgtggccgtgccattacaggtactaacagacggcctttg
aagtctttggcagacatgattaagggtaagcaaggccgtttccggcagaacttgctcggt
aagcgcgtcgattactctggccgttcggtcatcgtggtaggacctaccttgcgcttgcac
caatgcggcctgccgaaaaaaatggccttggagttgttcaagccgtttattttcagcaaa
ctgcaattccgtggcttggcgacgaccattaaggccgccaagaaaatggtcgagcgtgaa
ggcacggaagtctgggatattctcgaagaggttatccgcgaacatccgattttgctgaac
cgcgccccgactttgcacagattgggtatccaagcgtttgagccgaccctgatcgaaggt
aaggctatccagctgcatccgttggtctgtagcgccttcaacgccgactttgacggcgac
cagatggcggtgcatatccccttgtctattgaagcgcagttagaagcgcggacgttgatg
atggcgaccaataacattttgtcgccagcgaacggtgagccggtcattaacccgtcccaa
gacgtggttttggggctgtattacatcagccgcgaaaaaattaacgcacggggcgacggc
agcatttttgtcgataccggggaaatccataaggcgttgcaagccaaatcggtggaattg
caggcgaaaatcgaattgcgcattacccaaaaattccttaacgataagggtgaaaaagag
tccaagacttaccgggtcaaaaccacggtaggccgggctttgatttgggaagtggtgccc
gacttgatgccgtatgaattggtcaattgcgatatgaccaaaaagaacatttcgcggttg
attaactacagctaccgttatttgggcaataaggaaaccgtcgtgttggccgaccagctg
atgtatttgggcttccgttacgcgaccatttccggtgtgtccttcggtattgaagacatg
gcgattccggccaaaaaagtcgacattattgccgccgccgaagccgaagtgaacgaaatc
caaagccagtattcatcgggtttggtcaccgacggcgagcgctataacaaggttgtcgac
atctggtcccatgctaacgaccaagtcgctaaggtcatgatggacggcctcggtgaagag
tcggtggttgatgcacaaggcaataccgtcaaacaaaaatcctttaactccatctttatg
atggcggaatcaggggcgcggggttctgcggcgcagatccggcagttggcggggatgcgc
ggtctgatggcgaagccggacggttcgatcattgaaacgccgattaccgctaacttccgt
gaaggtcttgacgttttacaatactttatttctacccacggagcgcggaaaggtctggcc
gatacggcgttaaaaaccgccaactccggttacttgacgcgccgcttggtcgacgttgcc
caggatttggtgattaccggccaagattgcggcaccaaagacggtctggtcatgatgccg
atcattgaaggtggtgacgtggtcgagccgttgtccgaacgcgttttgggccgtgtggtg
gtcaacgatgtgatggatccggctaacgagaacatcatcgtacctgcgggcacgttgctg
aacgagcattgggtatcggtgttggacgagcacagtgtcgaccagttgattgtccgctcg
gtcatcacctgcgaaaaccgtcatggtgtttgtgcggcctgttatggccgtgacttaggc
cgtggccaccacgtcaacatcggtgaagcggtcggtgttatcgccgcgcaatccattggt
gagccgggtacccagttgaccatgcggacgttccacatcggtggggcggcttcgcggtca
gcggcgatcagtaacgtccaagtcaaatcggcgggtacggtacgccttagtaacttaaaa
tcagtcgccaaccgcgaaggcaatttggtcgcggtgtcccgttcaggtgaggtgtgcgtg
gtcgatgattatggccgtgagcgcgaacgttacaaaatcccttacggggcggtattgtcg
gtacaggaaggcagcaagatcagtgccggcgacattattgtcacttgggacccattcacg
catccggtcatcaccgaggtggacggtattgtcgagttggtcaactttgttgacggcgtg
acggtacaaaaacaatccgacgaagtcacgggcttaagctccttggtcgttaccgatcct
aagcaacgcggtagtgcgggtaaagaattgcggcctatggtgaagctgcttgaccatgac
ggcaacggcatttacctgcccggcactgaaattccggcgcaatacttcttacccgccggc
gcgattgcgggtattaaggacggcggcgaagtgaaggtcggtgacgtattggcaagaatt
ccgcaagaatccagtaaaacccgtgacatcacgggtggtttgccgcgtgtcgccgacttg
ttcgaagcgcgtaaaaccaaagatccggcgattttagcggaaaccagcggtaccatttct
ttcggcaaggaaaccaaaggcaagcaacgggtcatcattaccgatgcccagggcgaacag
gttgagaccctgatccccaaatggcggcatatcaccgtctttgagggtgagtatgtggaa
aaaggcgaaaccatcgccgaaggtgaattgacgccgcacgacatcctgcgtttgaggggt
attgaggagttggccaactatttggtcaaggaaattcaagacgtttaccgtctgcaaggt
gtgaagatcaacgataagcatatcgaatgtatcattcggcaaatgctgagaaaagttgag
attaccgcgtccggcgacacggcgttcttaaaaggcgaccaagtagagcgtgcggcggtc
aggtttgaaaatgagcggattgaaaatgaaggtaagattccggccagcttcgaatcggtg
ctgctcggtatcaccaaagcgtcattggcgaccgaatcgttcatctctgctgcgtctttc
caagaaaccacccgggtcttgaccgatgcggcggtacgcgggttgagcgacagcctgcaa
ggtctgaaagaaaacgttatcgtcggtaggctgatacccgcaggtacagggttggcctat
catgaaaacagaaagaaccgtttcgcgcaacagcatctggcagaaaccgccagcgctacg
gtggtagacaccgaagaagcgttgaagcaagccttaaatatctaa
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integrated database retrieval system
