Methylovulum psychrotolerans: CEK71_09295
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Entry
CEK71_09295 CDS
T04929
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
mpsy
Methylovulum psychrotolerans
Pathway
mpsy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mpsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CEK71_09295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpsy03400
]
CEK71_09295
Enzymes [BR:
mpsy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
CEK71_09295
DNA repair and recombination proteins [BR:
mpsy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CEK71_09295
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CEK71_09295
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CEK71_09295
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ASF46258
UniProt:
A0A1Z4BYA2
LinkDB
All DBs
Position
2027351..2028805
Genome browser
AA seq
484 aa
AA seq
DB search
MSSPTLYWHDYETFGADPQRDRPAQFAGVRTDNDFTIIDEPLVVYCQLAADSLPHPDACL
ITGITPQIAAKNGVCEAEFIRLIHAQLARPHTCALGYNSIRFDDEVTRNSLYRHFYDPYA
REWQHGNSRWDLLDVVRAAKALRPDGIQWPVDGLGKPSFRLEHLTAANGIGHANAHDALA
DVYATIAVAKLLKTKQPKLYQFFWQHRSKYEALNLLQLGRFVPLLHVSGMYPALRHCLAV
IVPLCQHPGNTNGVVVYDLAVDPTPLLSLSVEEIRQRLFTATEALPEGTARIPLKTVHIN
KCPVLAPMSVLRPADRERLGVDLPQCQAHLAALQTAPDIAAKVAAVFAAVGDAPGVPADP
DLALYSGGFFSDADKRQMAKIPTLPAETLAAARFPFADPRLPEMLFRYRARNYPHTLSAT
EAQAWRQSCVDRLTGRAGAGSLTFSAFFRQLESLRALPDTNADVLEALAAYAADKMQALG
LAAD
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
ttgagttcaccgaccctgtactggcatgattatgagacgtttggtgccgacccgcaacgg
gatcgacccgcgcaatttgccggtgtccgtaccgacaacgattttactattattgacgag
ccgctggtggtgtattgccagcttgctgccgatagcctcccgcatcctgacgcttgcctg
attaccggcattaccccccaaatagcggccaaaaacggtgtgtgcgaggcggaatttatc
cgcctcatccatgcccaattggcgcgtccgcatacttgtgccttaggctataacagcatc
cgttttgacgatgaagtaacgcgcaatagcctgtatcggcatttttacgacccttatgca
cgggaatggcagcatggcaattcgcgctgggatttgctggatgtggtcagggcggctaag
gccttgcgtcctgacggtatccaatggcctgttgacgggctgggcaagcccagtttccgg
ctcgagcacttgaccgccgccaacggtatcggccatgccaatgcccatgacgcgctggcc
gatgtttatgccactattgccgtcgctaaactgcttaagacgaaacagccgaagctgtac
cagtttttttggcagcaccgtagcaagtatgaggcgttaaacttgttgcagttggggcgg
tttgtgccgttgttgcatgtttcgggtatgtatccggccttacggcattgtttggcggtg
attgtgccgttatgccagcatccgggcaataccaatggtgtggtggtttatgatttggcg
gttgatcctacgccgctgttaagcttgtcggtggaggagattcgccagcggctgttcacg
gcgaccgaggcgttgcccgaaggtacggcgcggataccgctaaaaacggtgcatatcaat
aaatgtccggttttagcgccgatgtcggtactgcggcctgccgatagggagcgtttgggc
gtggatttgccccagtgccaagcgcatttggcggccttacagacggcacctgatattgcc
gcgaaagtggcggcggtgttcgcggcggtcggcgatgcgccgggcgttcccgccgatcct
gatctggctttgtatagcggcggattttttagtgatgccgataagcggcaaatggcgaaa
atccccacgctgcccgctgagacgttggcggcggcgcggtttccgtttgccgacccgcgc
ttgccggaaatgctctttaggtatcgggcgcgtaattatccgcacactttgtcggcaacc
gaggcgcaagcgtggcggcaaagctgtgttgaccgtttgacgggcagggcaggggcgggg
agcttgacgtttagtgcgttttttcgccaattggagagcttacgcgccctgccggacacg
aatgccgacgtgttggaagctttagcggcttatgcggcggataaaatgcaggctttgggg
ttggcggcggattga
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