Methylovulum psychrotolerans: CEK71_11815
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Entry
CEK71_11815 CDS
T04929
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mpsy
Methylovulum psychrotolerans
Pathway
mpsy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CEK71_11815 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpsy03400
]
CEK71_11815 (recD)
Enzymes [BR:
mpsy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CEK71_11815 (recD)
DNA repair and recombination proteins [BR:
mpsy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CEK71_11815 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
SH3_13
Helicase_RecD
RecD_N
UvrD-helicase
AAA_22
SLFN-g3_helicase
nSTAND3
UvrD_C
NTPase_1
AAA_28
AAA_7
SRP54
T2SSE
PIF1
AAA
CbiA
Motif
Other DBs
NCBI-ProteinID:
ASF46704
UniProt:
A0A1Z4BZI0
LinkDB
All DBs
Position
complement(2598048..2599718)
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AA seq
556 aa
AA seq
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MIDNLTVKNMSLEHQPYTRLDSAFARFLSQRSRLEDSQRPAFEKLLIRLSYEQNQGHNCI
AISAAEQALVAASGLADDEGGRPLVVEQNRLYLQRYWQYEQRLAGQLKAMMANATPAPER
LDSLLARYFPPLSDAIDWQREAAKVVVKQPFSIITGGPGTGKTTTVVKILAVLQELAAQP
LLIALAAPTGKAAMRLQESIGSRKADLPCSEAIKNQIPETVTTLHRLLGARPPSPYFRHH
AQQPLIYDLVVVDEASMVDLALMSKLVDALKPSARLILLGDKDQLASVESGAVLADMTHS
LPEQTLELQTSHRFGGVIKRLADAVNQQEAEQAWQVLQQGDPACLLLSEDPISYAAAQYR
TYLQLLHSGADFPTLYQQFSQFQVLCANRQGKHSVADLNQRIEQKLAEQRHIHVTGLWYV
GRPIMVTQNNAALQLYNGDIGLCLPHQGQQGKLMVYFQRADGSVKKYLPARVPPCETVYA
MTIHKSQGSEFAQVLVVLPEAINPVLTKELLYTAITRAKTTVKIVADKALWMQAIAQKVA
RVTGLVAKFQDGCVNF
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgatagataacctgactgttaagaacatgagcctagaacatcaaccctatacccgccta
gacagcgcgttcgcgcgtttccttagccagcgtagccgcctagaagacagccagcggcca
gcctttgaaaaattgctgatccgcttgtcttacgagcagaaccaaggccataactgcatt
gccatcagcgcggctgagcaagcgctggtggcggcttccggtttggcggatgatgaaggc
gggcggcctttggtggtggagcaaaaccgcctgtatctacagcgttattggcagtacgaa
caacgcttggccgggcagcttaaggccatgatggccaatgccacgcccgccccggagcgg
ctcgatagtttactggcgcggtattttccgccgttatcggacgctatcgactggcagcgc
gaagccgccaaggtcgtggttaagcaaccttttagcatcattacgggcgggccgggcacg
ggtaagactacgactgtggtgaaaatcctcgcggtgctgcaagaactggcggctcagccc
ttattaatcgctttagccgccccgacaggtaaggcggcgatgcgcctgcaagagtccatc
ggtagccgcaaggccgatttgccctgttccgaagcgataaaaaaccagattcccgaaact
gtcaccacgctgcaccgcctgttaggcgcaaggccgccgtcaccgtatttccgccaccac
gcccaacagccgttaatttatgatttggtggtggttgacgaagcgtctatggtcgatttg
gccttaatgagcaagttggtggatgcccttaagccctccgcgcggctaatcttattaggc
gataaagaccagttggcctcggtcgaatccggtgcggtgctggcagacatgacccatagc
ctgcctgaacaaaccttagagctgcaaacctcgcaccgctttggtggcgtgattaaacgc
ttggcggatgccgtcaaccagcaagaggccgagcaggcttggcaggtattgcagcaaggc
gacccggcttgtctgctgttaagcgaagacccgattagctatgccgccgcccaataccgt
acttatttgcagttactgcacagcggcgcggattttcctaccctttaccagcaatttagc
caatttcaggttttgtgcgccaaccgccaaggcaagcacagcgtcgctgaccttaatcag
cggattgagcaaaagctcgccgagcaacgccatatccatgttacgggcttgtggtatgtc
gggcggcctattatggtgacgcaaaataacgccgctttacagctctataatggtgacatc
ggcttgtgtttgccgcatcaggggcaacagggcaagctcatggtgtacttccaacgcgcc
gatggcagcgtcaaaaagtacctgcccgcccgcgtcccgccctgcgagaccgtttacgcc
atgaccatccacaaaagccaaggttcagaatttgcccaagtgctggttgtcctgccggaa
gccattaatccggtgctgaccaaagaactgctgtacaccgccatcacgcgtgccaaaacc
actgtgaaaatagtggccgataaagccctctggatgcaggccattgcccaaaaagtggcg
cgggtcactggattagtggcaaagtttcaggatgggtgcgttaatttctga
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