Methylovulum psychrotolerans: CEK71_12185
Help
Entry
CEK71_12185 CDS
T04929
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mpsy
Methylovulum psychrotolerans
Brite
KEGG Orthology (KO) [BR:
mpsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mpsy03016
]
CEK71_12185 (rnd)
Enzymes [BR:
mpsy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CEK71_12185 (rnd)
Transfer RNA biogenesis [BR:
mpsy03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CEK71_12185 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
ASF46773
UniProt:
A0A1Z4BZS4
LinkDB
All DBs
Position
complement(2676928..2678091)
Genome browser
AA seq
387 aa
AA seq
DB search
MTTINYINTPDKLTAVCALIRDSAWLALDTEFLREKTYYPKFCLLQIATPEWVACIDPLA
LPDLDELFTALENPAIVKVFHSCRQDLEIFYQLRGKLPAPIFDTQVAAPLLGYQDNPGYA
MLVSSLLNINLSKAHTRADWSKRPLTEAQIEYAADDVIYLCQIYQIMLQKLAELGRADWL
KQDFAELSNPDVYAVDPAKAWLKIKGKNKLSGRQLAIIQAISEWREKMAQQEDRPKSWLL
RDELLFDIAKLQPETSADLAAVRGINENVVRRYGKELCQLISAAKNQPPIPLHNDGRAAK
KTQQQEAILDILTALVRIRAEENLLNPSILASRKDLEDLLLLEDDNDCPLLHGWRYAMAG
EELLGLLKGELLLGIQADKLAIIQARP
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgatcaactatatcaacacccctgataaacttaccgctgtgtgtgcgttgata
cgcgacagtgcttggctggccttggacaccgaatttttgcgggaaaaaacctactatccg
aagttctgcctgttacagatagccacccctgagtgggtggcttgcatagaccctttggcc
ttgccggatttggatgaattgtttacggcgcttgaaaaccctgctattgttaaggtattt
cattcttgccgtcaggatctggaaattttttaccaattgcgcggcaagctgcccgcgcca
atttttgacacccaagtcgccgcgccgttactgggttatcaggataatcccggttatgcc
atgctggtgtccagtttgctcaatatcaatcttagcaaagcccacacccgcgccgattgg
agcaagcgcccgttgaccgaagcgcaaatcgaatacgccgccgatgacgtgatttatctg
tgccagatttaccagatcatgttgcaaaagttggctgaactgggtcgtgccgattggttg
aaacaggattttgccgagttgtccaatcccgacgtttatgcggttgacccggccaaagcg
tggctaaaaattaagggcaaaaacaaattgtctggccgccagcttgccatcattcaggcc
attagcgaatggcgcgagaaaatggcccagcaagaagaccgcccgaaaagctggctattg
cgggacgagttgctgtttgacattgccaagttgcaaccggaaaccagtgccgatttggcg
gcggtacgcggcattaatgaaaatgtcgtgcgccgctatggcaaagaactctgccaactc
atcagtgccgccaaaaatcagccgccgatacccttacacaatgacgggcgggcggcgaag
aaaacccaacagcaagaggcgatcttggatattcttaccgccttagtcagaatccgtgcc
gaggaaaacctcctcaaccccagcatcctcgcctcgcgtaaagacttggaagacttgttg
ctgctggaggacgataacgactgtccgctgttgcacggctggcgttatgcgatggcaggc
gaagaattgcttggcctgttaaaaggtgaattgctgttggggatacaagcggataagctg
gcgattatccaggcacggccttaa
DBGET
integrated database retrieval system
