Methylovulum psychrotolerans: CEK71_15530
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Entry
CEK71_15530 CDS
T04929
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
mpsy
Methylovulum psychrotolerans
Pathway
mpsy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mpsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CEK71_15530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpsy03400
]
CEK71_15530
DNA repair and recombination proteins [BR:
mpsy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CEK71_15530
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CEK71_15530
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_22
AAA_30
IF2_N
Kinesin
Motif
Other DBs
NCBI-ProteinID:
ASF47360
UniProt:
A0A1Z4C1I8
LinkDB
All DBs
Position
3411783..3413786
Genome browser
AA seq
667 aa
AA seq
DB search
MQKPFKIHSRFQPAGDQPTAIRQLVEGLQDGEVHQTLLGVTGSGKTFTIANVINQVQRPA
LIMAPNKTLAAQLYGEMKEFFPENSVEYFVSYYDYYQPEAYVPASDTFIDKDASLNEHIE
QMRLSATKALLERKDTIVVATVSAIYGLGEPESYFQMVLHLVKGDLLEQRTLLRRLAEMQ
YTRNDVELRRATYRVRGEVIDIFPAESDSEALRVELFDNEVERLSLFDPLTGEIISRIAR
YTVYPKTHYVTPREQLLAAVDAIKLELKERVLQLEAANKLVEAQRLEQRTLFDIEMILEV
GYCSGIENYSRYLSGGAPGEPPPTMFDYLPDDAIVVIDESHVTVPQIGAMYKGDRSRKET
LVQYGFRLPSALDNRPLTFAEFEQKTPQRIYVSATPGAYEKAHSGVFVEQVVRPTGLLDP
VVEVRPAVTQVDDLLSEIHKRGVLKERVLVTTLTKRMAEDLTEYLTEHGVKVRYLHSDID
TVERVEIIRDLRLGQFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSVVSLVQTIGR
AARNVSGKAILYGDKITASMARAIDETDRRREKQHLFNTQHQIEPKTIFKSITDILQVAI
PGSGGSGKAVAKVAEAGADYTVMTPKQLAKTLKQLEESMYQHAKNLEFEQAAKIRDEIKR
LQVQLLV
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaaaaccgtttaaaatccatagccgtttccagcctgcgggcgaccagccgactgcc
atccggcagttggttgagggtttgcaagatggcgaagtccaccagaccctgttaggggtc
acgggttcgggcaaaaccttcacgattgccaatgtcattaaccaagtgcagcgtccggcg
ctgattatggcacctaataagaccttggcggcgcagctctacggggaaatgaaggagttt
ttcccggaaaacagcgtcgagtatttcgtttcctactacgactattaccagccggaggcc
tatgtccccgcatccgataccttcatcgacaaagacgcgtcgttgaacgaacacattgaa
caaatgcgtttgtcggccaccaaagccttgttggagcgtaaagataccattgtcgtggcg
acggtgtcggcgatttatggcttgggggaaccggagtcgtatttccagatggtgctgcat
ttggtcaaaggcgatttgttggagcagcgcactttattgcgccgtttggcggaaatgcag
tatacccgcaacgatgtcgaattacggcgggcgacctatcgggtgcgcggtgaggtgatc
gacatttttccggcggagtccgacagcgaagcgttacgggtcgagttgttcgataatgag
gtggaacgcttatcgttgtttgacccgttaacgggggagattatcagccgtatcgcccgt
tataccgtctatccgaaaacccattatgtgaccccgcgcgagcaattgctggcggcggtg
gatgcgattaagctggagttgaaagagcgggtgctgcaattggaagccgccaataagctg
gtcgaggcgcaacggctggagcagcgcaccttgtttgatattgagatgattttggaagtc
ggctattgttcggggatagaaaattattcgcgctatttgtccggtggggctccgggtgag
ccgccgccgaccatgttcgattatctgcccgacgatgccattgtggtgattgacgaaagc
catgtgactgtgccgcaaatcggcgcgatgtataagggcgaccgttcgcgtaaagaaacc
ttggtgcaatacggtttccgtttgccgtcggctttggataacaggccgttgacttttgcc
gagtttgagcaaaaaaccccgcagcgcatttatgtctcggccacaccgggggcttatgaa
aaagcccattccggggtatttgtcgaacaggtggtcaggccgacagggttattggaccct
gtggtggaggtgcgtccggcagtgacccaagtcgatgatttgctctcggagattcataag
cggggggtgttgaaggaaagggtcttggtaacgacgctgaccaagcgcatggcggaggat
ttgaccgaatacttgaccgagcatggcgttaaggtacgctatctgcattcggatattgat
acggtcgagcgggtcgagattatccgtgatttgcgcttaggtcagtttgacgtgctggtc
ggcattaacctcttgcgcgagggcttggacattcctgaggtgtccttggtggcgatactg
gatgccgataaggaaggttttttgcgctcggtggtgtctttggtgcagactataggccgc
gccgcgcgtaatgtcagcggcaaggccattttgtacggtgataagattaccgcgtctatg
gctagggccattgatgaaaccgaccgccgccgcgaaaaacagcatctgtttaatacccag
caccagattgaaccgaaaaccatttttaaatccattaccgatattttgcaggtcgccatc
cccggttccggcggttcgggtaaggccgtcgctaaggtggctgaggccggtgccgattac
acggtcatgacccctaagcagttagcgaaaacgcttaagcaattggaggagtctatgtat
cagcacgcgaaaaatctggagtttgagcaggccgctaaaatcagggatgagataaagcgc
ttacaggtgcaactgttggtgtga
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