Methylibium petroleiphilum: Mpe_A0089
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Entry
Mpe_A0089 CDS
T00470
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
mpt
Methylibium petroleiphilum
Pathway
mpt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mpt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mpe_A0089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpt03400
]
Mpe_A0089
Enzymes [BR:
mpt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Mpe_A0089
DNA repair and recombination proteins [BR:
mpt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Mpe_A0089
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
ABM93051
UniProt:
A2SBW2
LinkDB
All DBs
Position
85229..86020
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AA seq
263 aa
AA seq
DB search
MLRLVSLNLNGIRSAANKGWVEWAEKSAIDCMGVQELKAQAADLGGRFDQVAGLKGHFHY
ADKKGYSGVGLYTRGTPSDVITGIGEPEFDAEGRYVEARFDTPQRKLSIISCYFPSGSSS
DERQQAKFRFLALFYPYLELLKATREFILVGDVNIAHREIDLKNWKSNQKNSGFLPEERA
WMSRALDELGLVDVHRTLRPDDTGEAYTWWSNRGQAWANNVGWRIDYHLATPALAALARS
ASVYKAQRFSDHAPLTVDYELSL
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
gtgttgcgtctggtctcgctcaatctcaacggcatccgttccgcggccaacaagggctgg
gtcgaatgggccgagaaaagcgccatcgattgtatgggcgtgcaggagctcaaggcccag
gcggccgacctgggcgggcgtttcgaccaggtggccggcctgaaaggccacttccactat
gccgacaagaagggctactccggcgtcggcctgtacacgcgcggcacgccgagcgacgtg
atcaccggcatcggcgagcccgagttcgatgccgaggggcgctacgtcgaggcccgcttc
gacacgccccagcgcaagctgtcgatcatcagttgctactttcccagcggctccagctcc
gacgagcggcagcaggccaagttccgtttcctggccctgttctacccttacctcgagctg
ctgaaggcgacccgcgagttcatcctggtgggcgacgtgaacatcgcgcaccgcgaaatc
gacctgaagaactggaagagcaaccagaagaacagcggcttcctgcccgaggagcgtgcg
tggatgagccgcgcgctcgacgaactgggcctggtcgacgtgcaccgcacgctgcgaccc
gacgacacgggcgaggcttacacgtggtggagcaatcgaggccaggcctgggccaacaac
gtcggttggcgcatcgactaccacctggcgacgccggcgctcgccgcgctggcgcgttcg
gcgtcggtctacaaggcgcagcgcttttccgaccacgccccgttgacggtcgattacgaa
ctttcgctgtga
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