Methylibium petroleiphilum: Mpe_A0303
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Entry
Mpe_A0303 CDS
T00470
Name
(GenBank) putative DNA polymerase-related protein, bacteriophage-type
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mpt
Methylibium petroleiphilum
Pathway
mpt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mpt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mpe_A0303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpt03400
]
Mpe_A0303
Enzymes [BR:
mpt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Mpe_A0303
DNA repair and recombination proteins [BR:
mpt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Mpe_A0303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABM93265
UniProt:
A2SCH6
LinkDB
All DBs
Position
328124..328906
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AA seq
260 aa
AA seq
DB search
MVWDERQAAMLAEMGIRVWQAPAAAASPVIDAKVEAAVSPVAAASPAPVVPRVAVARGAR
PEDVEAMDWPTLRAAVAGCTACGLCRGRTNTVFGVGHTQAHWMVVGEAPGEQEDRLGEPF
VGKAGQLLDHMLQALGLTRRAEGEGLQPAQQVYIANVLKCRPPMNRNPQPEEVAQCEPYL
ARQVALLQPRLILAMGRFAVQSLLQTGEPIGRLRGRIHQYQGVPAIVTYHPAYLLRNPAD
KAKAWDDLCLAREVMRGARP
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggtctgggatgaacgacaggccgcgatgctggcggagatgggcatccgtgtgtggcaa
gcgcctgcggctgcggcttcgcccgtgatcgatgcgaaggtcgaggcagcggtcagcccg
gtcgccgccgcctcgcccgccccggtggtaccgcgggtcgccgtcgcacgcggtgcccgc
cccgaagatgtcgaggcgatggactggccgaccctgcgtgccgccgtcgccggttgcacc
gcctgcgggctgtgccgcggtcgcacgaacacggtgttcggcgtcgggcacacgcaggcg
cactggatggtcgtcggcgaggcgccgggcgaacaggaagaccgcctgggcgagcccttc
gtcggcaaggccgggcagttgctcgaccacatgctgcaggccctgggcctgacgcgccgg
gccgaaggcgagggactgcagccggcgcagcaggtctacatcgccaacgtgctgaagtgc
cggccgccgatgaaccgcaatccgcagcccgaggaagtggcgcagtgcgagccctacctg
gcccgccaggtggcgctgctgcagccgcggctgattctcgcgatgggccgcttcgcggtg
caatcgctgctgcagaccggtgaaccgatcggccgcctgcggggccggatccaccagtac
cagggggtgcccgccatcgtgacctatcaccccgcctacctgctgcgcaacccggccgac
aaggcgaaggcctgggacgacctctgtcttgcgcgcgaggtgatgcgcggcgcgcgcccc
tga
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