Methylibium petroleiphilum: Mpe_A0631
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Entry
Mpe_A0631 CDS
T00470
Name
(GenBank) putative ATP-dependent RNA helicase 2
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mpt
Methylibium petroleiphilum
Pathway
mpt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mpe_A0631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpt03019
]
Mpe_A0631
Enzymes [BR:
mpt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Mpe_A0631
Messenger RNA biogenesis [BR:
mpt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mpe_A0631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
ABM93593
UniProt:
A2SDF4
LinkDB
All DBs
Position
666000..667484
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AA seq
494 aa
AA seq
DB search
MQDDLTMASPALPAEAPPARFDTLALDPKLLRAVAESGYLLMTPIQAKAIPLVLAGRDVM
GAAQTGTGKTAAFSLPLLQKMLKHESSSTSPARHPVRALVLAPTRELADQVANNVKTYSK
HTQLRATVVFGGIDMKPQTAELKRGVEVLIATPGRLLDHIEAKNCSLSQVEYVVLDEADR
MLDIGFLPDLQRILSYLPKSRQTLLFSATFSPEIKKLANSYLQDPILVETARPNATASTV
EQRFYRVEDDDKRNAVKQLLRTRAITQSIVFVNSKLGAARLARAFERDGLRTQALHGDKS
QDERLKALAAFKAGEVDLLVATDVAARGLDIADLPAVFNFDVPFNAEDYVHRIGRTGRAG
ASGLAITLVSRDDARLVSDIEKLIKKKLDIEALELEDDRPRRAPRRDDGERDVVRREDDG
RRTSAAAAGDRPAPARRPTPPAAPSDPFFSQPYEAQAGIEPVWEKSAAQASAPSSGLSRY
IKAKKRVASLLGGK
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacgatctcacaatggcgtcaccggccctgccggccgaggcgccgcccgcccgt
ttcgacaccctcgcgctcgatccgaagctgctccgcgcggtggccgaatccggttacctg
ctgatgacgccgatccaggccaaggcgattccactcgtgctggccggccgcgacgtcatg
ggcgccgcgcagaccggcaccggcaagacggcggccttctcgctgcccctgctgcagaag
atgctcaagcacgagagcagcagcacgtcgccggcccgccacccggtgcgggccctggtg
ctggccccgactcgtgagctggcggaccaggttgccaacaacgtcaagacctactccaag
cacacccagctgcgcgccacggtcgtgttcggcggcatcgacatgaagccgcagacggcc
gaattgaagcgcggcgtcgaggtactgatcgcgacgccggggcggctgctcgaccacatc
gaggccaagaactgctcgctcagccaggtggagtacgtggtgctcgatgaggccgaccgc
atgctcgacatcggcttcctgcccgacctgcagcgcatcctgagctacctgcccaagagc
cggcagacgctgctgttctcggccacgttctcgcccgagatcaagaagctggccaacagc
tacctgcaggacccgatcctggtcgagacggcgcggcccaatgccacggcgtcgacggtc
gagcagcgcttctatcgtgtcgaggacgacgacaagcgcaatgccgtgaagcagctgctg
cgcacgcgagccatcacgcagagcatcgtcttcgtcaattccaagctgggcgcggcgcgc
ctggcgcgtgccttcgagcgcgacggcctgcgcacccaggccctgcacggcgacaagtcg
caggacgagcgcctgaaggccctggccgcgttcaaggccggcgaggtggatctgctggtg
gccaccgacgtggccgcacgcggactcgatatcgccgacctgccggcggtgttcaatttc
gacgtgcccttcaacgccgaggactacgtgcaccgcatcggccgcaccggccgcgccggg
gcctcgggcctggcgatcacgctggtgtcgcgtgacgatgcccggctggtgtccgacatc
gagaagctgatcaagaagaagctcgatatcgaggcgctcgaactcgaggacgaccgtcct
cgccgtgcgccgcggcgtgacgatggtgagcgcgacgtcgtgcgccgcgaggatgacggg
cgccggaccagcgctgccgcggcaggcgatcggcctgcgccagcgcggcgccccactccg
ccggcagcgccctccgatccgttcttcagccagccctacgaagcccaggccggcatcgag
cccgtgtgggagaagtcggccgcccaggcgtcggcgcccagcagcgggctgtcgcgctac
atcaaggccaagaagcgcgtggcgtccttgctgggtggcaagtaa
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