Methylibium petroleiphilum: Mpe_A1148
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Entry
Mpe_A1148 CDS
T00470
Name
(GenBank) DNA-directed DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mpt
Methylibium petroleiphilum
Pathway
mpt03030
DNA replication
mpt03410
Base excision repair
mpt03420
Nucleotide excision repair
mpt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mpe_A1148
03410 Base excision repair
Mpe_A1148
03420 Nucleotide excision repair
Mpe_A1148
03440 Homologous recombination
Mpe_A1148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpt03032
]
Mpe_A1148
03400 DNA repair and recombination proteins [BR:
mpt03400
]
Mpe_A1148
Enzymes [BR:
mpt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Mpe_A1148
DNA replication proteins [BR:
mpt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Mpe_A1148
DNA repair and recombination proteins [BR:
mpt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Mpe_A1148
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mpe_A1148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
ABM94109
UniProt:
A2SEX0
LinkDB
All DBs
Position
1227099..1229912
Genome browser
AA seq
937 aa
AA seq
DB search
MSAHDDSCLLLVDGSSYLYRAYHALPDLRNPAGEPTGAVRGMVAMLKKLREEFPSAHAAC
VFDAKGKTFRDDWYPEYKANRASMPEDLARQIAPIHAVVTLLGWPVLEIPGIEADDVIGT
LARAAAARGQRVIVSTGDKDLAQLVDAHVTLINTMSGERLDVAGVTEKFGVPPERIVDYL
TLVGDAVDNVPGVEKVGPKTAAKWIAEHGSLDGVMAAADAIKGVAGENLRKALDWLPLGR
RLVTVKTDCDLSEALPGWNGTAAWDTLTWRETDRAALLAFYTHNDFRAWRNELESARAAA
APAPQVAAAEAGEGQSALFADPAGTGPADGGVAPAVDKRYETVLAREAFEAWRARIEAAD
LVALDTETDSLDGMRARIVGLSFSVQPYEACYIPLAHTYPGAPDQLPLDEVLAALKSWLE
DGSRAKLGQNVKYDTHVFANHGIAVRGYVHDTLLQSYVLEAHKPHSLESLASRHLDRKGL
SYEDVAGKGAQQIPFAQVELTRATEYSGEDSDMTLDVHRVLWPQLEAAPRLREVYERIEM
PTSVILGRIERHGVLIDSALLARQSADLAQRMVALEQEAHALAGQPFNLGSPKQIGEILF
NKLGIPAKKKTASGAPSTDEEVLAELAADYPLPAKLLEHRSLAKLKGTYTDKLPLMVNAA
TGRVHTNYAQAVAVTGRLASNDPNLQNIPIRTPEGRRVREAFIAPPGHVILSADYSQIEL
RIMAHISEDPGLLKAFAEGLDVHRATASEVFNVPVAEVSSEQRRYAKVINFGLIYGMGAF
GLASNLGIEQKAAKDYIDRYFARFAGVKRYMDETRARAKELGYVETLFGRRIYLPEINGG
NGPRRTGAERQAINAPMQGTAADLIKLAMIAVQAALDAQQRATCMVMQVHDELVFEVPEA
ELDWARTAVPELMAGVAELKVPLLAEVGVGANWDLAH
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctcacgacgattcctgcctgttgctggtggacggttccagctacctctaccgc
gcctaccacgcgctgcctgacctgcgcaatccggccggcgagccgaccggcgcggtgcgc
ggcatggtggccatgctgaagaagctgcgcgaggagttcccgtcggcgcacgcggcctgc
gtgttcgacgccaagggcaagaccttccgcgacgactggtacccggagtacaaggcgaac
cgcgcctcgatgccggaggatctggcgaggcagatcgcgccgatccacgctgtggtgacg
ctgctgggctggccggtgctcgagatccccggcatcgaggccgacgacgtgatcggcacg
ctggcgcgggcggccgccgcgcgcggccagcgggtcatcgtctcgacaggcgacaaggac
ttggcgcagctcgtcgacgcgcacgtgacgctgatcaacacgatgagcggcgagcggctc
gacgtggccggcgtgaccgagaagttcggtgtgccgcccgagcgcatcgtcgactacctg
acgctggtcggcgacgcggtcgacaacgtgccgggagtcgagaaggtggggccgaagacc
gccgccaagtggatcgcggagcacggctcgctggacggcgtgatggccgcggccgacgcc
atcaagggcgttgccggcgagaacctgcgcaaggcgctggattggctgccgctgggtcgc
cggctggtgaccgtgaagaccgactgtgatctgtcggaggcactgccgggctggaacggc
acggccgcctgggacacgctgacctggcgcgagaccgaccgcgcggccctgttggccttc
tacacgcacaacgacttccgcgcgtggcgcaatgagctcgagtcggcccgtgccgccgcc
gcgccggccccgcaagtggcggcggcggaggccggggaagggcagagcgcgctgttcgcc
gacccggcgggtaccgggccggccgatggtggcgtcgcgcctgcggtcgacaagcgctac
gagaccgtgctggcgcgcgaggccttcgaggcgtggcgcgcgcgcatcgaggcggccgac
ctggtggctctggacacggagaccgactcgctcgacggcatgcgggcacgcatcgtcggc
ctgagcttcagcgtgcagccctacgaggcctgctacatcccgctcgcccacacctacccg
ggcgcgcccgaccagctgccgctcgatgaggtgctggcggcgctgaagtcctggctcgag
gacggctcgcgcgccaagctcggccagaacgtcaagtacgacacccatgtgttcgccaac
catggcatcgcggtgcgtggctatgtgcatgacaccctgctgcagagctacgtgctggag
gcgcacaagccgcacagcctggaaagcctcgccagccgccacctcgaccgcaagggcctg
agctacgaggacgtggccggcaagggcgcgcagcagatcccgttcgcgcaggtcgagctg
acgcgcgccaccgagtattcgggcgaggacagcgacatgacgctggacgtgcacagggtc
ttgtggccgcagctcgaggccgcgccgcgcctgcgcgaggtctacgagcgcatcgagatg
ccgacctcggtgatcctcggccgcatcgagcgtcacggcgtgctgatcgacagcgcgctg
ctcgcgcgccagagcgccgatctggcgcagcgcatggtggcactggagcaggaggcgcat
gcgctggccggccagcccttcaacctgggcagccccaagcagatcggcgagatcctgttc
aacaagctgggcatcccggcgaagaagaagaccgccagcggcgcgccgagcaccgacgag
gaggtcctggccgagctggccgccgactacccactgccggccaagctgctggagcaccgc
tcgctcgccaagctcaagggcacctacacggacaagctgccgctgatggtgaacgcggcc
accggccgcgtgcacaccaactacgcgcaggcagtcgcggtgaccggccggctggccagc
aacgaccccaacctgcagaacatcccgatccgcacgcccgagggccggcgcgtgcgcgag
gccttcatcgcgccgcccggccacgtgatcctgagcgccgactactcgcagatcgagctg
cgcatcatggcccacatctccgaggatccgggcctgctgaaggcctttgccgagggcctg
gacgtgcaccgcgccaccgcgagcgaggtgttcaacgtgccggtggccgaggtcagcagc
gagcagcggcgctatgccaaggtcatcaacttcgggctgatctacggcatgggcgccttc
ggtctggcgagcaacctcggcatcgagcagaaggccgccaaggactacatcgatcgctac
ttcgcgcgcttcgccggcgtgaagcgctacatggacgagacccgcgcgcgggccaaggag
ctgggctacgtggagaccttgttcgggcgccgcatctacctgcccgagatcaacggcggc
aacggtccgcgccgcaccggcgccgagcgccaggcgatcaacgcgccgatgcagggcacc
gcggccgacctgatcaagctcgcgatgatcgcggtgcaggcggcgctcgatgcccagcag
cgcgccacgtgcatggtgatgcaggtgcacgacgagctggtgttcgaagtgcccgaggcc
gagctcgactgggcccggaccgccgtgccggaactgatggccggcgtggccgagctgaag
gtgccgctgctggccgaggtgggcgtgggcgcgaactgggacctcgcccactga
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