Methylibium petroleiphilum: Mpe_A1282
Help
Entry
Mpe_A1282 CDS
T00470
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mpt
Methylibium petroleiphilum
Pathway
mpt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mpe_A1282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpt03021
]
Mpe_A1282
03019 Messenger RNA biogenesis [BR:
mpt03019
]
Mpe_A1282
Transcription machinery [BR:
mpt03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Mpe_A1282
Messenger RNA biogenesis [BR:
mpt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Mpe_A1282
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
OB_RNB
AAA
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABM94244
UniProt:
A2SFA5
LinkDB
All DBs
Position
complement(1380455..1381747)
Genome browser
AA seq
430 aa
AA seq
DB search
MVTLAPEVRFMHLSELKAQHISELIKVAETLEIENSARMRKQELMFAIMKKRAKQGEQVF
GDGVLEVLPDGFGFLRSPEASYLASTDDIYLSPSQIRRFNLHTGDMIEGEVRVPKDGERY
FALVKVDIVNGITPEENKQKIMFENLTPLFPKEQFKLERDIKAEENITSRIVDLIAPLGK
GQRALLVSAPKSGKTVMMQNLAHAITANYPEVHLIVLLVDERPEEVTEMQRTIRGEVISS
TFDEPAARHVQVAEMVIERAKRLVELKKDVVILLDSITRLARAYNNVLPSSGKVLTGGVD
ANALQRPKRFFGAARNIEEGGSLTIIGTALVDTGSRMDEVIYEEFKGTGNCEIHLDRRMA
EKRVYPSILLNKSGTRREELLLKPEILQKTWILRKLLYSMDEIEAMEFILDKMKATKTNL
DFFDMMRRGG
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
gtggtcacgcttgcccccgaggtgcgcttcatgcatctatccgaactcaaagcccagcac
atatccgaactgatcaaggtcgccgaaaccttggagatcgagaacagcgcccgcatgcgc
aagcaggagctgatgttcgcgatcatgaagaagcgcgccaagcagggcgagcaggtgttc
ggcgacggcgtgctggaagtgctgcccgatggcttcggcttcctgcgctcccccgaggcg
agctacctcgcgagcaccgacgacatctacctcagccccagccagatccgccgcttcaac
ctgcacaccggcgacatgatcgaaggcgaggtgcgcgtccccaaggacggcgagcgctac
ttcgccctggtgaaggtggacatcgtcaacggcatcacgccggaggagaacaagcagaag
atcatgttcgagaacctgacgcccttgttccccaaggagcagttcaagctcgaacgtgac
atcaaggccgaggagaacatcaccagccgcatcgtcgatctgatcgccccgctgggcaag
ggccagcgggcgctgctggtgtcggccccgaagagtggcaagacggtgatgatgcagaac
ctcgcgcacgccatcaccgccaactacccagaagtgcacctgatcgtgctgctggtcgac
gagcggcccgaggaagtgaccgagatgcagcgcacgatccgcggcgaggtcatcagttcc
accttcgacgagcccgccgcacgccacgtgcaggtggccgagatggtgatcgagcgcgcc
aagcggctggtggagctgaagaaggacgtggtgatcctgctcgactcgatcacccgcctg
gcgcgcgcttacaacaacgtgcttccctcctccggcaaggtgctgacgggtggcgtcgat
gccaatgcgctgcagcgccccaagcgcttcttcggcgccgcgcgcaacatcgaggaaggc
ggttcgctgaccatcatcggcaccgcgctggtcgacaccggcagccgcatggacgaggtg
atctacgaggagttcaagggcaccggcaactgcgagatccacctggatcgccgcatggcc
gagaagcgcgtctacccgtcgatcctgctgaacaagtcgggcacccgccgcgaggagctg
ctgctcaagccagagatcctgcagaagacctggatcttgcgcaagctgctctattcgatg
gacgagatcgaggcgatggagttcatcctcgacaagatgaaggccacgaagaccaacctc
gacttcttcgacatgatgcgccgcggcggctga
DBGET
integrated database retrieval system
