Methylibium petroleiphilum: Mpe_A1360
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Entry
Mpe_A1360 CDS
T00470
Name
(GenBank) Exodeoxyribonuclease I subunit C
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
mpt
Methylibium petroleiphilum
Pathway
mpt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mpt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Mpe_A1360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpt03400
]
Mpe_A1360
Enzymes [BR:
mpt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
Mpe_A1360
DNA repair and recombination proteins [BR:
mpt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Mpe_A1360
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Mpe_A1360
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Mpe_A1360
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ABM94322
UniProt:
A2SFI3
LinkDB
All DBs
Position
1464241..1465680
Genome browser
AA seq
479 aa
AA seq
DB search
MSEHSFYWHDYETFGRWPRRDRPAQFAGVRTDAELNEIGPPLMHYCQPAPDFLPDPESCL
LTGILPQTCLEQGLPEHAFAAAIERELAAPGTVGVGYNTIRFDDEVTRHLFWRNLMDPYA
REWQNGCGRWDLLDVVRCTYALRPEGIEWPRHEDGRASFKLEHLTAANGLAHEAAHDALS
DVRATIGLARLIRRHQPRLWDFCFRLHRKDAVMAEIGAGARRPFLHISGMYPAERGCLAA
VWPLGAHPTNKNELIVWDLAADPSELYGLDAAAIRQRLFTKAEDLPEGTTRLPIKSIHIN
KSPIVIGNLKTLSPAMAERWGYDAARVQRHADIALAHDALPRALWADVFARPAPEQAPDV
DEDLYGGFVSNADRRTLERLRGLPPEGLAGQRPSFEDGRLEELLFRYRARNFPDTLDAEE
RAQWEQHRAERLHLGVGGGSSLAAFFERIDALSESADERGQDILGALYDYAEQIAPSAP
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacacagcttctactggcacgactacgaaaccttcgggcgctggccgcggcgc
gaccggccggcgcagttcgctggcgtgcgcaccgacgccgagctcaacgagatcggtccg
ccgctgatgcactactgccagcccgcgcccgatttcctgcccgaccccgaatcgtgcctg
ctgaccggcatcctgccgcagacctgcctcgagcagggcctgccggaacatgcttttgct
gccgccatcgagcgcgagctggcggcgccgggcacggtgggcgtgggctacaacaccatc
cgcttcgacgacgaggtgacgcgccatctgttctggcgcaacctgatggacccctatgcc
cgcgaatggcagaacggctgcgggcgctgggacctgctcgacgtggtgcgctgcacctat
gcgctgcggcccgagggcatcgaatggccgcgccacgaggacgggcgggcctcgttcaag
ctcgagcacctgacggcggccaatggcctggcacatgaggcggcacacgacgcgctgtcg
gacgtgcgtgccaccatcggcctggcgcggctgatccgccggcaccagccccgcctgtgg
gacttctgcttccggcttcaccgcaaggacgcggtgatggcggagatcggtgccggtgcg
cggcggcccttcctgcacatctccggcatgtacccggccgagcggggttgcctcgccgcg
gtgtggccgctcggcgctcacccgaccaacaagaacgaactgatcgtctgggatctggca
gccgaccccagcgaactctacggactcgatgccgccgcgatccgccagcgcctgttcacc
aaggccgaagatctgccggagggcacgacgcgcctgccgatcaagagcatccacatcaac
aagtcgccgatcgtcatcggcaacctcaagacgctgagcccggcgatggccgagcgctgg
ggctacgacgcggcccgggtgcagcgtcacgccgacatcgccctggcgcacgacgcgctg
ccacgcgcgctgtgggccgacgtgttcgcgcggcccgcgcccgagcaggcacccgacgtc
gacgaagacctgtatggcggcttcgtctccaatgccgaccggcgcacgctcgagcggctg
cgtgggctgccgccggaagggctggcgggccagcgcccgtcgttcgaggacgggcgcctg
gaggaactgctgttccgttaccgggcgcgcaactttccggacacgctcgatgccgaggag
cgggcccagtgggagcagcatcgcgccgagcggctgcacctgggcgtcggcggcggcagc
agcctggcggccttcttcgaacgcatcgacgcgctcagcgagtcggccgacgagcggggc
caggacatcctgggcgcgctctacgactacgccgagcagatcgcgccgtcggccccctga
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