Methylibium petroleiphilum: Mpe_A1374
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Entry
Mpe_A1374 CDS
T00470
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
mpt
Methylibium petroleiphilum
Brite
KEGG Orthology (KO) [BR:
mpt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpt03019
]
Mpe_A1374
Enzymes [BR:
mpt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Mpe_A1374
Messenger RNA biogenesis [BR:
mpt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Mpe_A1374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
Helicase_C
OB_NTP_bind
DEAD
HA2_C
AAA_22
HA2_N
NACHT
AAA_19
nSTAND3
T2SSE
AAA_25
AAA_23
FtsK_SpoIIIE
AAA_30
SRP54
PhoH
Motif
Other DBs
NCBI-ProteinID:
ABM94336
UniProt:
A2SFJ7
LinkDB
All DBs
Position
1478131..1482192
Genome browser
AA seq
1353 aa
AA seq
DB search
MPETAPRTAAPAPPRSLPPIRFPEALPVSARRDEIAEAVQRHQVVIVCGETGSGKTTQLP
KLMLALGRGKANAKPGERGRLIGHTQPRRIAASSVAKRIADELETPLGEVVGYKVRFQDR
LTSGASVKLMTDGILLAETQTDPLLQAYDTLIIDEAHERSLNIDFLLGYLRQILPKRPDL
KVIVTSATIDADRFARHFGSVRPTPDRPKPGGAPSGGGDSAERGAWGHELVPAPVIQVSG
RLFPVEQRWRAFEESREHDLNDAIADAVDELWREGRGDVLVFLPGEREIREAADHLRKHL
LQQHRGGPQPEILPLFARLSQTEQDRVFQAGNGRRIVLATNVAETSLTVPGIRYVVDAGT
ARVKRYSYRNKVEQLQVEPISQAAANQRAGRCGRVADGICIRLYDEKDYAGRPRFTDPEI
LRSSLAGVILRMKALGLGDVEAFPFLEPPPKKAIADGYALLNELGATDDDNALTAIGKEL
ARLPLDPRIGRMILAARDRQALAEVLVIASALSVQDVRDRPLEQQQAADQKHKLFDDERS
EFVGYLKLWQWIEAGRGHAAHPSAMPAPARAPDGRGEGTAAHKLSNRQQEQRLREHFVSP
RRVREWRDIHSQLHTVVAEHGWRLNGTPATYEQLHLAMLAGLLGNVGCKSDDEDWYLGAR
GIKFWRHPGAHLSKKPGRWLIAAELVETTRLFGRALAAIEPAWIVQVAGHLLKKQLLEPH
WEKKAAEVVALERATLYGLVVYNNKRVNFGNVDPAAAREIFIREALVNGEWESRLPFLAH
NRKLIRQVEELEHKSRRQDVLVDDELIFAFYDQQLPKDVHSGTTLERWYRAQSPQQPKLL
MLTKDELMRHEAAGITTAAFPKTLRLGGIDCEATYLHEPGDSKDGLTVTVPIYALNQVND
ERCEWLVPGLLKDKVLALMKSLHQRPRSRLVPLPEAAAEFCELVPFAQGGLVDALLKAVR
ERTQIAVQRNDFKLETLQPHLFMNFRVVDEHGRQLGMGRHLPTLKAELGAQARSAFQALA
ALKLGGVEQAANSPSPQPSPTSGRGNRTNSLPLPPAGEGRGEGTPPSATPPQRHTTWSFG
ELPELMEIRRGAQSLVGFPALIDKGGHVEIEVFDEPDVAATRHRAGLRRLVALQIKEPLK
YLEKSIPDLPRMAVAYMALGGSADELRAQIIDVALDRAFLVEPLPTDAAGFAKRIDEGRT
RLNLIAQEVARLAATVLAEQATATRKLKDTRPAKEVADDVAAQLARLCPKRFLAETGYAQ
LHHLPRYLKGVTLRLDKWRADPARDAARLAELRPIEQRYLRRVAELKGAADARLDEFRWL
IEELRVSLFAQELRTPQPVSAKRLEKAWSQLSA
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagaccgctccccgcaccgccgcccctgcaccgccgcgatcgctgccacccatc
cgcttccccgaggcgctgccggtctcggcccggcgcgacgaaatcgccgaggcggtgcag
cgccaccaggtcgtcatcgtctgcggcgagaccggctccggcaagaccacgcagctgccc
aagctgatgctggcgctgggccgcggcaaggccaatgccaaacccggcgagcggggacgg
ctgatcggccacacccagccgcggcgcatcgcggcgagctcggtcgccaagcgtatcgcc
gacgagctggaaacgccgctcggcgaggtggtgggctacaaggtgcgcttccaggaccgg
ctgacgtcgggtgcctcggtgaagctgatgaccgacggcatcctgctggccgagacgcag
accgacccgctgctgcaggcctacgatacgctgatcatcgacgaggcccacgagcgcagc
ctcaacatcgacttcctgctcggctacctgcggcagatcctgccgaagcggcccgacctg
aaggtgatcgtgacgtcggcgacgatcgatgccgatcggtttgcacggcatttcgggagc
gtccgcccgacgccggaccgccccaagccgggcggcgcgccctcggggggcggcgacagt
gcggagcgcggagcgtgggggcacgaactcgtgccggcgccggtgatccaggtgagcggc
cggctgttcccggtcgagcagcgctggagggctttcgaggagtcgcgtgagcacgacctg
aacgacgcgatcgccgacgccgtcgacgaactgtggcgcgagggccgcggcgacgtgctg
gtgttcctgcccggcgagcgcgagatccgcgaggccgccgaccacctgcgcaagcacctg
ctgcagcagcaccgcggcggcccgcagcccgagatcctgccgttgttcgcgcggctgtcg
cagaccgagcaggaccgcgtgttccaggccggcaacgggcggcgcatcgtgctggccacc
aacgtggccgagacctcgctcacggtgcccggcatccgctacgtggtcgacgccggcacg
gcgcgcgtcaagcgctacagctatcgcaacaaggtcgagcagctgcaggtggagcccatc
agccaggccgccgccaaccagcgtgccggccgttgcgggcgcgtggccgacggcatctgc
atccgcctatacgacgaaaaggattacgcgggccggccgcgcttcaccgaccccgagatc
ctgcgcagctcgctggccggcgtgatcctgcgcatgaaggcgctgggcctcggcgacgtg
gaggccttccccttcctcgagccgccgccgaagaaggcgatcgccgacggctacgcgctg
ctgaacgagctgggcgcgaccgacgacgacaacgcgctcaccgcgatcggcaaggagctc
gccaggctgccgctggacccgcgcatcggccgcatgatcctggctgcgcgcgaccgccag
gcgctggccgaggtgctggtgatcgccagcgcactgtcggtgcaggacgtgcgtgaccgg
ccgctcgaacagcagcaggccgccgatcagaagcacaagctgttcgacgacgagcgctct
gagttcgtcggctacctcaagctgtggcagtggatcgaggctggacgcggccacgccgcg
cacccgtcggccatgccggcgccggcccgtgcgccggacggccgcggcgagggcacggcc
gcccacaagctctccaaccgccagcaggagcagcgcctgcgcgagcacttcgtcagcccg
cgccgcgtgcgagagtggcgcgacatccattcgcagctgcacaccgtggtggccgagcac
ggctggcggctcaacggtacgccggccacctacgagcagctccacctggcgatgctggcc
gggctgctgggcaacgtgggttgcaagagcgacgacgaggattggtacctcggcgcgcgc
ggcatcaagttctggcgccaccccggcgcgcacctgagcaagaagccgggccgctggctg
atcgccgccgagctggtggagaccacgcggctgttcggccgcgcgctggcggcgatcgag
ccggcgtggatcgtgcaggtggccggccacctgctgaagaagcagctgctcgagccgcat
tgggagaagaaggcggccgaggtggtggcgctggagcgcgccacgctgtacgggctggtg
gtctacaacaacaagcgggtcaacttcggcaacgtcgaccccgccgccgcgcgcgagatc
ttcatccgcgaggcgctggtgaacggcgagtgggagagccgcctgcctttccttgcgcac
aaccgcaagctgatccgccaagtggaggagctggagcacaagtcgcgccggcaggacgtg
ctggtcgacgacgaactcatcttcgccttctacgaccagcaactgcccaaggacgtgcac
tccggcaccacgctcgaacgctggtaccgcgcccagagccctcagcagccgaagctgctg
atgctgaccaaggacgagctgatgcgccacgaggccgcgggcatcacgaccgcggccttc
ccgaagacgctgcgcctgggcggcatcgactgcgaggccacctacctgcacgagcccggc
gacagcaaggacggcctgaccgtcaccgtgccgatctacgcgctgaaccaggtgaacgac
gagcgctgcgagtggctggtgccgggcctgctgaaggacaaggtgctggcgctgatgaag
agcctgcaccagcggccgcgctcgcgcctggtgcccctgcccgaggccgcagccgagttc
tgcgagctggtgccgttcgcgcagggcggcctggtcgacgcgctgctgaaggcggtgcgc
gagcgcacccagatcgcggtgcagcgcaacgacttcaagctcgagacgctgcagccccac
ctgttcatgaacttccgtgttgtcgacgagcacggccgccagctcggcatgggccgccac
ctgccgacgctgaaggccgagttgggcgcgcaggccaggtcggcgttccaggcactggcg
gccttgaagctgggcggggtggagcaggcggcgaactcgccatcaccccaaccctctccc
accagcgggagagggaaccgcacaaactctctccctctcccgcccgcgggagagggccgg
ggtgagggcacgccaccctcggccacgccgcctcagcgccacaccacctggtccttcggc
gaactgcccgaactaatggagatccgccgcggcgcgcagagcctggtcggcttcccggcg
ctgatcgacaagggcggccacgtggagatcgaggtgttcgacgagcccgacgtcgcggcc
acgcgccaccgcgccgggctgcgccgcctggtcgcgctgcagatcaaggagccgctgaag
tacctggagaagagcatccccgacctgccgcgcatggcggtcgcgtacatggcgctcggc
ggcagcgccgacgaactgcgggcgcagatcatcgacgtggcgctcgaccgcgccttcctc
gtcgagccgctccccaccgatgcagcgggcttcgcgaagcgcatcgacgagggccgcacg
cggctcaacctgatcgcgcaggaggtggcgcgcctcgcggcgaccgtgctcgccgagcag
gcgaccgccacccgcaagctcaaggacacgcggccggccaaggaggtggccgacgacgtg
gcggcgcaactggcgcgtctgtgccccaagcgcttcctggccgagaccggctacgcgcag
ttgcaccacctgccgcgctacctgaagggcgtcacgctgcggctcgacaagtggcgcgcc
gacccggcgcgcgatgcggcccgcctggccgaactgcgcccgatcgagcaacgctacctg
cgccgcgtggccgaactcaagggcgcggccgacgcgcggctcgacgagttcagatggctg
atcgaggaactgcgcgtgagccttttcgcacaggaactccggacaccccaacccgtgagc
gccaagcgcctggagaaggcctggtcccagctgagcgcgtga
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integrated database retrieval system
