Entry |
|
Name |
(GenBank) DNA-directed DNA polymerase
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KO |
|
Organism |
mpt Methylibium petroleiphilum
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:mpt00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mpe_A2534
03430 Mismatch repair
Mpe_A2534
03440 Homologous recombination
Mpe_A2534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:mpt03032]
Mpe_A2534
03400 DNA repair and recombination proteins [BR:mpt03400]
Mpe_A2534
Enzymes [BR:mpt01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Mpe_A2534
DNA replication proteins [BR:mpt03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Mpe_A2534
DNA repair and recombination proteins [BR:mpt03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Mpe_A2534
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SSDB |
|
Motif |
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Other DBs |
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LinkDB |
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Position |
complement(2702152..2703996)
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AA seq |
614 aa
MSTLVLARKYRPRHFGEMVGQEHVVQALANALTSQRLHHAYLFTGTRGVGKTTVSRILAK
SLNCTGPDGQGGITAQPCGVCPACRDIDAGRFVDYTELDAASNRGVDEISQLLEQSAYKP
VVGRFKVFMIDEVHMLSSTAFNAMLKTLEEPPEYLKFVLATTDPQKVPVTVLSRCLQFNL
RPMAPETVLAHLEQVLAAEGISAEPGALRLLARGAHGSMRDALSLTDQAIAFGAGTLQEA
GVRQMIGAVGRSHVYALIDALAAGDGAGVVATADALRAEGLSAEGALEEMAVVLQQLALL
QVLPDALDAADPDTAALVQRAGLLPADETQLLYSIALHGRAELALAPDEYSGLVMVLLRM
LAFRPPGAARTETVVRPGQATPAAAPRAATALVRGSAPAVPLARSPATASLAVAPPSKAD
PVPTRPPAPLIAKSPSSVPPWEDDIPLAEEMSQPPATVAPRPAPPTVARDDAAGGPAPTE
MTRGPLGDRWAALVRQLTDANAIAALVRELALQAECVAIDTGETRLRLRVERESLRNPNH
AERLQAALAAALGHAVVLDVEAGVVNDTPARRDAAAREQRQREAEALIHNDPLVLQLTAQ
FKTARIVPGSIKPV |
NT seq |
1845 nt +upstreamnt +downstreamnt
atgagcaccttggtcctggcccgcaagtaccgtccacgccacttcggcgagatggtcggc
caggagcatgtggtgcaggcgctggccaacgcgctcacctcgcagcggctgcaccatgcc
tacctgttcaccggcacgcgcggcgtcggcaagaccacggtgtcgcgcatcctcgcgaag
agcctcaactgcaccgggcccgacggtcagggaggcatcaccgcgcagccctgcggtgtg
tgtccggcctgccgcgacatcgacgccggccgcttcgtcgactacaccgagctcgacgcg
gcctcgaaccgcggcgtcgacgagatctcgcaactgctggaacagtcggcctacaagccg
gtcgtcgggcgattcaaggtcttcatgatcgacgaggtgcacatgctctccagtaccgcg
ttcaacgcgatgctgaagacgctggaggagccacccgagtacctgaagttcgtgctggcg
acgaccgacccacagaaggtaccggtcacggtgctgtcgcgctgcctgcagttcaacctg
cggccaatggcgcccgagacggtgctcgcgcacctggagcaggtgctggcggccgaaggc
atctcggccgagccgggggcgctgcggctgctggcgcgcggcgcgcacggctcgatgcgc
gatgcgctgtcgctcaccgaccaggccatcgccttcggtgccggcacgctccaggaagcc
ggcgtgcgccagatgataggcgccgtgggccgcagccatgtctatgcgctgatcgatgcg
ctggccgccggtgacggcgccggcgtggtggccacggccgacgcactgcgcgccgagggc
ctgtcggccgagggtgcgctggaggagatggcggtggtgctgcagcagctcgcgttgctg
caggtgctgcccgatgcgctggacgccgccgatcccgacaccgcggcactcgtgcagcgc
gccggcctgctgccggccgacgagacgcagctgctctacagcatcgcgctgcacggccgc
gccgagctggcgctggcgcctgacgaatacagcggcctggtgatggtgctgctgcgcatg
ctggcgttcaggccaccgggtgctgcacgcaccgagacggtggtgcggccgggccaggct
acgcccgcagcggcgccgcgtgccgcaaccgccctcgtgcgtggctcggcacctgccgtg
ccgctggcccgctcgccggcaaccgcgagccttgccgtggcgccaccgtccaaggcggac
cccgtgccgacccgaccgcctgcgccgctgattgcgaagagcccgtccagcgtcccgcca
tgggaggacgacatcccgctggcggaagaaatgtcccagcccccggcgacggtggcaccg
cgccccgcaccaccgaccgtcgcgcgcgacgacgcggctggtggtcctgcgccgaccgag
atgacccgcggtccgctgggcgaccgctgggccgcgctggtgcgccagctgaccgatgcg
aacgcgatcgcggcgttggtccgcgagctggcgctgcaggccgagtgcgtggccatcgat
accggcgaaacgcggctgcggctgcgcgtcgagcgagagagcctgcgcaatccgaaccat
gccgaacgcctgcaggcggcactggccgccgcgctgggtcacgcggtggtgctggacgtc
gaggccggtgtggtgaacgacacgccggcacggcgcgatgcagcggcgcgcgagcagcgc
cagcgcgaggccgaggcgctgatccacaacgaccccttggtgctgcagctcacggcgcag
ttcaagacggcccgcatcgtgccggggtcgatcaaacccgtctga |