Methylibium petroleiphilum: Mpe_A3171
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Entry
Mpe_A3171 CDS
T00470
Name
(GenBank) RNA polymerase sigma-32 factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
mpt
Methylibium petroleiphilum
Brite
KEGG Orthology (KO) [BR:
mpt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpt03021
]
Mpe_A3171
Transcription machinery [BR:
mpt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Mpe_A3171
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
IF2_N
HTH_3
Motif
Other DBs
NCBI-ProteinID:
ABM96124
UniProt:
A2SKN5
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All DBs
Position
3372326..3373285
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AA seq
319 aa
AA seq
DB search
MSFDAMNTTLSLNTSAGSQALTVRDPWALVPSLGDLNAYIAAVNRLPMLTLEEEQSLGQR
LRDEHDLEAAGRLVLSHLRLVVSVSRQYLGYGLPHGDLIQEGNVGLMKAVKRFDPSQGVR
LVSYALHWIKAEIHEYVLRNWRMVKLATTKAQRKLFFNLRSMKQGFKGDATDSDLHRSTL
TDAEIDIVASELKVKREEVIEMETRLSGGDVALDPQTDDGDESYAPIAYLADDRHEPTRV
LDAQRRDALAGDGIGEALDVLDARSRRIVEERWLKVNDNGSGGMTLHELAAEYGVSAERI
RQIEVAAMKKMRKALAAYA
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcgatgccatgaacaccacgctgtccctgaacacttccgcgggctcgcaggcg
ctgacggtgcgcgatccgtgggcgctggtcccgtcgctcggcgacctgaatgcctatatc
gccgccgtgaaccgcctgccgatgctgacgctcgaggaagagcagtcgctcggccagcgg
ctgcgtgacgaacacgacctcgaggctgccggtcgcttggtgctgtcgcacttgcgtctg
gtcgtgtcggtatcgcgtcagtacctgggctacggactccctcacggcgacctgatccag
gaaggcaatgtcggcctgatgaaggccgtcaagcgcttcgaccccagccagggcgtgcga
ctggtcagctatgcgctgcactggatcaaggccgaaattcacgagtacgtgctgcgcaac
tggcgcatggtcaagctggcgaccacgaaggcacagcgcaagctgttcttcaacctgcgc
tcgatgaaacagggtttcaagggcgatgccaccgacagcgacctgcaccgcagcacgctg
accgatgccgagatcgacatcgtggccagtgaactcaaggtcaagcgcgaggaagtgatc
gagatggagacgcgcctgtcgggtggcgatgtcgcgctcgatccacagaccgacgacggc
gacgagagctacgcgccgatcgcctatctggccgacgaccgccacgagccgacgcgtgtg
ctcgacgcccagcgccgtgacgcgctggccggcgacggcatcggcgaggcgctggacgtg
ctggacgcgcgcagccgacgcatcgtcgaggaacgctggctcaaggtcaacgacaacggt
tcaggcggcatgacgctgcatgaactggccgccgagtacggcgtcagcgccgagcggatc
cgccagatcgaggtagccgccatgaagaagatgcgcaaggcgctggccgcctacgcctga
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